Adam Hallaj , Logan F. Turner , Carolyn A. McArdle, Moisés A. Bernal
{"title":"De novo transcriptomes for two species of snappers from the Western Atlantic (Lutjanus griseus and Lutjanus synagris)","authors":"Adam Hallaj , Logan F. Turner , Carolyn A. McArdle, Moisés A. Bernal","doi":"10.1016/j.margen.2022.101005","DOIUrl":null,"url":null,"abstract":"<div><p>Transcriptomes are appropriate resources for studying species that lack sequenced genomes, as they can serve as references for a broad suite of genetic applications, including: phylogenetic assessments, population genomics, and evaluate responses to environmental fluctuations. Here, we present the transcriptomes of two species of marine fishes of commercial and ecological relevance in the Western Atlantic: <em>Lutjanus griseus</em> and <em>L</em>. <em>synagris</em>. This project represents a step forward on developing genomic resources for important species of the Atlantic Ocean.</p></div>","PeriodicalId":18321,"journal":{"name":"Marine genomics","volume":"67 ","pages":"Article 101005"},"PeriodicalIF":1.3000,"publicationDate":"2023-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Marine genomics","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1874778722000836","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
Abstract
Transcriptomes are appropriate resources for studying species that lack sequenced genomes, as they can serve as references for a broad suite of genetic applications, including: phylogenetic assessments, population genomics, and evaluate responses to environmental fluctuations. Here, we present the transcriptomes of two species of marine fishes of commercial and ecological relevance in the Western Atlantic: Lutjanus griseus and L. synagris. This project represents a step forward on developing genomic resources for important species of the Atlantic Ocean.
期刊介绍:
The journal publishes papers on all functional and evolutionary aspects of genes, chromatin, chromosomes and (meta)genomes of marine (and freshwater) organisms. It deals with new genome-enabled insights into the broader framework of environmental science. Topics within the scope of this journal include:
• Population genomics and ecology
• Evolutionary and developmental genomics
• Comparative genomics
• Metagenomics
• Environmental genomics
• Systems biology
More specific topics include: geographic and phylogenomic characterization of aquatic organisms, metabolic capacities and pathways of organisms and communities, biogeochemical cycles, genomics and integrative approaches applied to microbial ecology including (meta)transcriptomics and (meta)proteomics, tracking of infectious diseases, environmental stress, global climate change and ecosystem modelling.