Skrining Potensi Essential Oil Cananga odorata dalam Penghambatannya Terhadap ACE II dan TMPRSS2 sebagai Anti Covid-19: Pendekatan In Silico

Yoni Rina Bintari, D. Wulandari
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Abstract

COVID-19 is a disease caused by viruses of the coronavirus class that are known to enter humans through the Angiotensin Coverting Enzyme (ACE II) receptor protein and transmembrane serine protease (TMPRSS 2). COVID-19 has become a pandemic, so it requires an agent that acts as an anti-Covid-19. Cananga odora is an herb that contains EO (Essential Oils) and is widely grown in Indonesia. EO are known to have antiviral potential.This study aims to explore the potential of EO from C.odora using a molecular docking approach by measuring its inhibition of ACE II (Q9BYF1) and TMPRSS2 (7MEQ). The inhibitory potential was calculated from the binding affinity using Pyrex Autodock Vina software. The docking results are then visualized using Biovia Discovery Studio and PyMOL. Prediction of physicochemical and pharmacokinetic profiles through pKCsm web. The docking results showed that geranyl acetate inhibited ACE II at Lys 562 with a gibs energy of -7.5 kcal. Thebest inhibition of TMPRSS2 by cedrole with energy gibs -6.2 kcal/mol via Pro 375. The active compound C. odorata has a different inhibitory mechanism from the control (chloroquine). The results of the in silico test predict the pharmacokinetic profile of EO from C.odora geranil asetat which has good absorption, distribution, metabolism and excretion values and is non-toxic, and cedrole can cross the blood brain barier.
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COVID-19是一种由冠状病毒类病毒引起的疾病,已知这些病毒通过血管紧张素转换酶(ACE II)受体蛋白和跨膜丝氨酸蛋白酶(TMPRSS 2)进入人体。COVID-19已经成为一种大流行,因此需要一种抗COVID-19的药物。加南加是一种含有EO(精油)的草药,在印度尼西亚广泛种植。已知EO具有抗病毒潜力。本研究旨在利用分子对接的方法,通过测定其对ACE II (Q9BYF1)和TMPRSS2 (7MEQ)的抑制作用,探索臭气弧菌EO的潜力。利用Pyrex Autodock Vina软件根据结合亲和力计算抑制电位。然后使用Biovia Discovery Studio和PyMOL对对接结果进行可视化。通过pKCsm网络预测理化和药代动力学特征。对接结果表明,香叶醇乙酸酯在Lys 562位点对ACE II的抑制能量为-7.5 kcal,通过Pro 375对TMPRSS2的抑制效果最好,能量为-6.2 kcal/mol。该活性化合物与对照物(氯喹)具有不同的抑制机制。硅片试验结果预测了香椿象中EO的药代动力学特征,该药物具有良好的吸收、分布、代谢和排泄价值,且无毒,雪松可穿过血脑屏障。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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