{"title":"New sequence alignment by a measure due to entangled correlation in two consecutive residues","authors":"Toshihide Hara, Keiko Sato, M. Ohya","doi":"10.1109/ISABEL.2010.5702920","DOIUrl":null,"url":null,"abstract":"We develop a new sequence alignment called MTRAP by introducing a measure due to entangled correlation in two consecutive residues. We showed that the alignment accuracy could be improved by our approach. In the benchmark test by PREFAB 4.0, our method achieves the highest ranking compared with other methods such as ClustalW2, TCoffee and MAFFT.","PeriodicalId":165367,"journal":{"name":"2010 3rd International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2010)","volume":"183 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2010-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2010 3rd International Symposium on Applied Sciences in Biomedical and Communication Technologies (ISABEL 2010)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ISABEL.2010.5702920","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
Abstract
We develop a new sequence alignment called MTRAP by introducing a measure due to entangled correlation in two consecutive residues. We showed that the alignment accuracy could be improved by our approach. In the benchmark test by PREFAB 4.0, our method achieves the highest ranking compared with other methods such as ClustalW2, TCoffee and MAFFT.
京公网安备 11010802042870号
京ICP备2023020795号-1
分享
求助内容：
应助结果提醒方式：
扫码关注我们
