Exploring new roles for RNA-binding proteins in epigenetic and gene regulation

IF 3.7 2区 生物学 Q2 CELL BIOLOGY Current Opinion in Genetics & Development Pub Date : 2023-12-20 DOI:10.1016/j.gde.2023.102136
Pedro Avila-Lopez , Shannon M Lauberth
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Abstract

A significant portion of the human proteome comprises RNA-binding proteins (RBPs) that play fundamental roles in numerous biological processes. In the last decade, there has been a staggering increase in RBP identification and classification, which has fueled interest in the evolving roles of RBPs and RBP-driven molecular mechanisms. Here, we focus on recent insights into RBP-dependent regulation of the epigenetic and transcriptional landscape. We describe advances in methodologies that define the RNA-protein interactome and machine-learning algorithms that are streamlining RBP discovery and predicting new RNA-binding regions. Finally, we present how RBP dysregulation leads to alterations in tumor-promoting gene expression and discuss the potential for targeting these RBPs for the development of new cancer therapeutics.

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探索 RNA 结合蛋白在表观遗传和基因调控中的新作用。
人类蛋白质组中有很大一部分是 RNA 结合蛋白(RBPs),它们在许多生物过程中发挥着重要作用。在过去的十年中,RBP 的鉴定和分类有了惊人的增长,这激发了人们对 RBP 不断演变的作用和 RBP 驱动的分子机制的兴趣。在此,我们重点介绍最近对 RBP 依赖性调控表观遗传和转录格局的深入研究。我们介绍了定义 RNA 蛋白相互作用组的方法学进展,以及简化 RBP 发现和预测新 RNA 结合区的机器学习算法。最后,我们介绍了 RBP 失调如何导致肿瘤促进基因表达的改变,并讨论了靶向这些 RBPs 开发癌症新疗法的潜力。
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来源期刊
CiteScore
7.90
自引率
0.00%
发文量
102
审稿时长
1 months
期刊介绍: Current Opinion in Genetics and Development aims to stimulate scientifically grounded, interdisciplinary, multi-scale debate and exchange of ideas. It contains polished, concise and timely reviews and opinions, with particular emphasis on those articles published in the past two years. In addition to describing recent trends, the authors are encouraged to give their subjective opinion of the topics discussed. In Current Opinion in Genetics and Development we help the reader by providing in a systematic manner: 1. The views of experts on current advances in their field in a clear and readable form. 2. Evaluations of the most interesting papers, annotated by experts, from the great wealth of original publications.[...] The subject of Genetics and Development is divided into six themed sections, each of which is reviewed once a year: • Cancer Genomics • Genome Architecture and Expression • Molecular and genetic basis of disease • Developmental mechanisms, patterning and evolution • Cell reprogramming, regeneration and repair • Genetics of Human Origin / Evolutionary genetics (alternate years)
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