Genomic Resource Insights into Strain WZ-12: An Antimicrobial-Producing Streptomyces Isolate from Star Anise Rhizosphere Soil

Jieming Pan, Xiaoshan Geng, Yulin Zhu, Qin Liu
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Abstract

Strain WZ-12, isolated from the rhizosphere soil of star anise trees, exhibits significant antifungal efficacy against a variety of fungi, including Colletotrichum horii, the pathogenic fungus responsible for anthracnose in star anise. Based on 16S rRNA gene sequencing and phylogenetic analysis, the strain was identified as a member of the Streptomyces genus. The genome of WZ-12 comprises a linear chromosome of 9,169,400 bp and a plasmid of 378,325 bp, possessing a G + C content of 71.12%. Of note, the genome encompasses 8,172 protein-coding genes, 21 rRNA genes, 74 tRNA genes, and 89 other non-coding RNA genes. The COG, Swiss-Prot, GO, KEGG, and NR databases annotated up to 79.17%, 50.50%, 13.17%, 37.51%, and 90.43% of potential genes, respectively. Remarkably, the genome hosts 175 antimicrobial resistance genes and 33 secondary metabolite gene clusters that likely contribute to the biosynthesis of diverse bioactive compounds such as antibiotics and agents with antitumor, antioxidant, immunosuppressive, anti-inflammatory, or stress tolerance properties. These findings highlight the potential of WZ-12 as a promising source of novel bioactive molecules and suggest its significant value as a valuable resource for developing innovative antimicrobial agents.
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WZ-12 菌株基因组资源透视:八角根瘤土壤中的抗菌链霉菌分离物
从八角树根瘤土壤中分离出的菌株 WZ-12 对多种真菌具有显著的抗真菌功效,包括八角炭疽病的致病真菌 Colletotrichum horii。根据 16S rRNA 基因测序和系统进化分析,该菌株被确定为链霉菌属的成员。WZ-12 的基因组由 9,169,400 bp 的线性染色体和 378,325 bp 的质粒组成,G+C含量为 71.12%。值得注意的是,该基因组包含 8172 个蛋白质编码基因、21 个 rRNA 基因、74 个 tRNA 基因和 89 个其他非编码 RNA 基因。COG、Swiss-Prot、GO、KEGG 和 NR 数据库分别注释了 79.17%、50.50%、13.17%、37.51% 和 90.43% 的潜在基因。值得注意的是,该基因组包含 175 个抗菌药耐药性基因和 33 个次级代谢物基因簇,这些基因簇可能有助于多种生物活性化合物的生物合成,如抗生素和具有抗肿瘤、抗氧化、免疫抑制、抗炎或抗应激特性的制剂。这些发现凸显了 WZ-12 作为新型生物活性分子来源的潜力,并表明它作为开发创新抗菌剂的宝贵资源具有重大价值。
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