Biodegradation of PVCs through in-vitro identification of Bacillus albus and computational pathway analysis of ABH enzyme

IF 3.1 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biodegradation Pub Date : 2024-01-30 DOI:10.1007/s10532-023-10064-z
Muhammad Naveed, Rida Naveed, Tariq Aziz, Arooj Azeem, Mahrukh Afzal, Muhammad Waseem, Metab Alharbi, Abdulrahman Alshammari, Abdullah F. Alasmari, Thamer H. Albekairi
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Abstract

Microplastics pose significant challenges to ecosystems and organisms. They can be ingested by marine and terrestrial species, leading to potential health risks and ecological disruptions. This study aims to address the urgent need for effective remediation strategies by focusing on the biodegradation of microplastics, specifically polyvinyl chloride (PVC) derivatives, using the bacterial strain Bacillus albus. The study provides a comprehensive background on the accumulation of noxious substances in the environment and the importance of harnessing biodegradation as an eco-friendly method for pollutant elimination. The specific objective is to investigate the enzymatic capabilities of Bacillus albus, particularly the alpha/beta hydrolases (ABH), in degrading microplastics. To achieve this, in-silico studies were conducted, including analysis of the ABH protein sequence and its interaction with potential inhibitors targeting PVC derivatives. Docking scores of − 7.2 kcal/mol were obtained to evaluate the efficacy of the interactions. The study demonstrates the promising bioremediation prospects of Bacillus albus for microplastics, highlighting its potential as a key player in addressing microplastic pollution. The findings underscore the urgent need for further experimental validation and practical implementation of Bacillus albus in environmental remediation strategies.

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通过体外鉴定白僵菌和 ABH 酶的计算途径分析实现聚氯乙烯的生物降解。
微塑料对生态系统和生物体构成重大挑战。它们可被海洋和陆地物种摄入,导致潜在的健康风险和生态破坏。本研究旨在利用白僵菌(Bacillus albus)菌株对微塑料(特别是聚氯乙烯(PVC)衍生物)进行生物降解,从而满足对有效补救策略的迫切需求。该研究全面介绍了有害物质在环境中积累的背景,以及利用生物降解作为消除污染物的环保方法的重要性。具体目标是研究白僵菌的酶解能力,特别是α/β水解酶(ABH)降解微塑料的能力。为此,研究人员进行了室内研究,包括分析 ABH 蛋白序列及其与针对聚氯乙烯衍生物的潜在抑制剂之间的相互作用。通过评估相互作用的有效性,获得了 - 7.2 kcal/mol 的对接分数。这项研究表明,白僵菌对微塑料具有广阔的生物修复前景,突出了其作为解决微塑料污染的关键角色的潜力。研究结果强调了在环境修复策略中进一步实验验证和实际应用白僵菌的迫切需要。
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来源期刊
Biodegradation
Biodegradation 工程技术-生物工程与应用微生物
CiteScore
5.60
自引率
0.00%
发文量
36
审稿时长
6 months
期刊介绍: Biodegradation publishes papers, reviews and mini-reviews on the biotransformation, mineralization, detoxification, recycling, amelioration or treatment of chemicals or waste materials by naturally-occurring microbial strains, microbial associations, or recombinant organisms. Coverage spans a range of topics, including Biochemistry of biodegradative pathways; Genetics of biodegradative organisms and development of recombinant biodegrading organisms; Molecular biology-based studies of biodegradative microbial communities; Enhancement of naturally-occurring biodegradative properties and activities. Also featured are novel applications of biodegradation and biotransformation technology, to soil, water, sewage, heavy metals and radionuclides, organohalogens, high-COD wastes, straight-, branched-chain and aromatic hydrocarbons; Coverage extends to design and scale-up of laboratory processes and bioreactor systems. Also offered are papers on economic and legal aspects of biological treatment of waste.
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