A computational framework for pharmaco-mechanical interactions in arterial walls using parallel monolithic domain decomposition methods

Q1 Mathematics GAMM Mitteilungen Pub Date : 2024-01-08 DOI:10.1002/gamm.202370002
Daniel Balzani, Alexander Heinlein, Axel Klawonn, Jascha Knepper, Sharan Nurani Ramesh, Oliver Rheinbach, Lea Saßmannshausen, Klemens Uhlmann
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Abstract

A computational framework is presented to numerically simulate the effects of antihypertensive drugs, in particular calcium channel blockers, on the mechanical response of arterial walls. A stretch-dependent smooth muscle model by Uhlmann and Balzani is modified to describe the interaction of pharmacological drugs and the inhibition of smooth muscle activation. The coupled deformation-diffusion problem is then solved using the finite element software FEDDLib and overlapping Schwarz preconditioners from the Trilinos package FROSch. These preconditioners include highly scalable parallel GDSW (generalized Dryja–Smith–Widlund) and RGDSW (reduced GDSW) preconditioners. Simulation results show the expected increase in the lumen diameter of an idealized artery due to the drug-induced reduction of smooth muscle contraction, as well as a decrease in the rate of arterial contraction in the presence of calcium channel blockers. Strong and weak parallel scalability of the resulting computational implementation are also analyzed.

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使用并行整体域分解方法的动脉壁药物-机械相互作用计算框架
本文提出了一个计算框架,用于数值模拟降压药物(尤其是钙通道阻滞剂)对动脉壁机械响应的影响。对 Uhlmann 和 Balzani 的拉伸依赖性平滑肌模型进行了修改,以描述药物与抑制平滑肌活化的相互作用。然后使用有限元软件 FEDDLib 和 Trilinos 软件包 FROSch 中的重叠施瓦茨预处理程序求解变形-扩散耦合问题。这些预处理器包括高度可扩展的并行 GDSW(广义 Dryja-Smith-Widlund)和 RGDSW(精简 GDSW)预处理器。仿真结果表明,由于药物导致平滑肌收缩减弱,理想化动脉的管腔直径预计会增大,而且在钙通道阻滞剂的作用下,动脉收缩率会降低。此外,还分析了计算实现的强并行和弱并行可扩展性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
GAMM Mitteilungen
GAMM Mitteilungen Mathematics-Applied Mathematics
CiteScore
8.80
自引率
0.00%
发文量
23
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Issue Information Regularizations of forward-backward parabolic PDEs Parallel two-scale finite element implementation of a system with varying microstructure Issue Information Low Mach number limit of a diffuse interface model for two-phase flows of compressible viscous fluids
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