Genetic Polymorphism of Interleukin-6 in Asymptomatic and ICU-Admitted COVID-19 Patients in Sulaymaniyah Province, Kurdistan Region of Iraq.

IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY Genetic testing and molecular biomarkers Pub Date : 2024-07-01 Epub Date: 2024-05-09 DOI:10.1089/gtmb.2023.0304
Peshnyar M A Rashid, Gaza F Salih
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Abstract

Background: The global pandemic of Coronavirus Disease 2019 (COVID-19) has resulted in significant fatality rates. Clinical outcomes for affected individuals range from being asymptomatic to severe illnesses requiring intensive care unit (ICU) admission. Among the various factors contributing to the variation in clinical outcomes, host genetics play a prominent role. Interleukin-6 (IL6), a key player in immune responses, has been identified as having a crucial impact on viral infections, including the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Specifically, certain variations known as single nucleotide polymorphisms (SNPs) in the IL6 promoter region have been found to significantly influence IL6 expression and the severity of viral infections. Materials and Methods: To explore the relationship between these genetic variations and COVID-19 in asymptomatic and ICU-admitted Kurdish patients, genetic sequencing was performed to determine the genotypes of nine IL6 SNPs. Results: The study findings revealed that although the proportion of the GG genotype of rs1800795 was slightly higher in asymptomatic COVID-19 cases, the difference was not statistically significant (chi2 = 2.666, p = 0.236). Notably, Kurdish patients displayed a uniform genetic makeup (monomorphic) for the dominant alleles of rs2069830 (C), rs142759801 (C), rs2069857 (C), rs2069829 (G), rs2234683 (G), rs13447446 (T), rs527770772 (C), and rs13447445 (C). Furthermore, patients carrying the haplotype GCGGCTCCC were found to have a 0.481-fold higher likelihood of being asymptomatic with COVID-19 (p = 0.016, OR = 0.481). Conclusions: This study demonstrates that the rs1800795 SNP is not statistically associated with COVID-19 at the genotype level. However, the presence of the dominant G allele of rs1800795 in the haplotype was found to be statistically associated with asymptomatic COVID-19 patients.

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伊拉克库尔德斯坦地区苏莱曼尼亚省无症状和入住重症监护室的 COVID-19 患者白细胞介素-6 的基因多态性。
背景:Coronavirus Disease 2019(COVID-19)在全球大流行,导致大量人员死亡。受影响者的临床结果从无症状到重症需要入住重症监护室(ICU)不等。在导致临床结果差异的各种因素中,宿主遗传起着重要作用。白细胞介素 6(IL6)是免疫反应的关键因素,已被确认对病毒感染(包括严重急性呼吸系统综合征冠状病毒 2(SARS-CoV-2))有重要影响。具体来说,IL6 启动子区域的某些变异称为单核苷酸多态性(SNPs),已被发现会显著影响 IL6 的表达和病毒感染的严重程度。材料与方法:为了探索无症状和入住 ICU 的库尔德患者中这些基因变异与 COVID-19 之间的关系,对 9 个 IL6 SNPs 进行了基因测序以确定其基因型。结果研究结果显示,虽然在无症状的 COVID-19 病例中,rs1800795 的 GG 基因型比例略高,但差异无统计学意义(chi2 = 2.666,p = 0.236)。值得注意的是,库尔德人患者在 rs2069830 (C)、rs142759801 (C)、rs2069857 (C)、rs2069829 (G)、rs2234683 (G)、rs13447446 (T)、rs527770772 (C) 和 rs13447445 (C) 的显性等位基因上表现出一致的遗传结构(单态)。此外,发现携带单倍型 GCGGCTCCC 的患者无 COVID-19 症状的可能性高 0.481 倍(p = 0.016,OR = 0.481)。结论本研究表明,在基因型水平上,rs1800795 SNP 与 COVID-19 没有统计学关联。然而,研究发现,单倍型中存在 rs1800795 的显性 G 等位基因与无症状 COVID-19 患者有统计学关联。
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来源期刊
CiteScore
2.50
自引率
7.10%
发文量
63
审稿时长
1 months
期刊介绍: Genetic Testing and Molecular Biomarkers is the leading peer-reviewed journal covering all aspects of human genetic testing including molecular biomarkers. The Journal provides a forum for the development of new technology; the application of testing to decision making in an increasingly varied set of clinical situations; ethical, legal, social, and economic aspects of genetic testing; and issues concerning effective genetic counseling. This is the definitive resource for researchers, clinicians, and scientists who develop, perform, and interpret genetic tests and their results. Genetic Testing and Molecular Biomarkers coverage includes: -Diagnosis across the life span- Risk assessment- Carrier detection in individuals, couples, and populations- Novel methods and new instrumentation for genetic testing- Results of molecular, biochemical, and cytogenetic testing- Genetic counseling
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