Expression profiling and bioinformatics analysis of serum exosomal circular RNAs in lymph node metastasis of papillary thyroid carcinoma.

IF 2.4 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Journal of Biomedical Research Pub Date : 2024-05-30 DOI:10.7555/JBR.37.20230304
Huiyong Peng, Zhangwei Zhu, Jie Xing, Qian Xu, Changfeng Man, Shengjun Wang, Yingzhao Liu, Zhengdong Zhang
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Abstract

Most papillary thyroid carcinoma (PTC) patients have a good prognosis. However, lymph node metastasis (LNM), the most common manifestation of disease progression, is frequently associated with a poor prognosis. Nevertheless, few studies have focused on the underlying mechanisms of LNM. In the current study, we aimed to investigate the potential role of exosomal circRNAs that contribute to LNM in PTC. We identified 9000 differentially expressed exosomal circRNAs in PTC patients with LNM, including 684 upregulated and 2193 downregulated circRNAs. Functional enrichment analysis revealed that these differentially expressed circRNAs were primarily involved in a variety of molecular and signaling pathways correlated with PTC progression and LNM. Through bioinformatics analysis, we identified 14 circRNA-miRNA-mRNA networks related to LNM-associated signaling pathways in PTC. Moreover, both circTACC2-miR-7- EGFR and circBIRC6-miR-24-3p- BCL2L11 axes were verified for their potential involvement in PTC with LNM. Additionally, we identified four upregulated circRNA-related hub genes and eight hub genes correlated with downregulated circRNAs, some of which were validated as being potentially involved in LNM in PTC. Collectively, our findings provide a novel framework for an in-depth investigation of the function of dysregulated exosomal circRNAs and their potential as biomarkers in PTC patients with LNM.

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甲状腺乳头状癌淋巴结转移中血清外泌体环状RNA的表达谱分析和生物信息学分析
大多数甲状腺乳头状癌(PTC)患者预后良好,但淋巴结转移(LNM)是最常见的进展性表现,往往导致预后不良。然而,很少有研究关注淋巴结转移的内在机制。本研究旨在确定外泌体循环RNA在PTC淋巴结转移中的潜在作用。我们发现,在PTC LNM患者中有9000个异常表达的外泌体circRNA,其中684个明显上调,2193个明显下调。功能富集分析表明,这些异常表达的circRNA主要富集在与PTC进展和LNM相关的多种分子和信号通路中。生物信息学分析筛选出了14个与PTC中LNM相关信号通路相关的circRNA-miRNA-mRNA网络。此外,还验证了circTACC2-miR-7-EGFR和circBIRC6-miR-24-3p-BCL2L11轴可能参与PTC的LNM。此外,我们还筛选出了4个上调的circRNAs相关枢纽基因和8个与下调的circRNAs相关的枢纽基因,通过验证,其中一些基因参与了PTC的LNM。总之,我们的数据为深入研究PTC LNM患者外泌体circRNA功能失调及其潜在生物标志物提供了一个新的框架。
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来源期刊
Journal of Biomedical Research
Journal of Biomedical Research MEDICINE, RESEARCH & EXPERIMENTAL-
CiteScore
4.60
自引率
0.00%
发文量
69
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