On complexity of colloid cellular automata

Andrew Adamatzky, Nic Roberts, Raphael Fortulan, Noushin Raeisi Kheirabadi, Panagiotis Mougkogiannis, Michail-Antisthenis Tsompanas, Genaro J. Martinez, Georgios Ch. Sirakoulis, Alessandro Chiolerio
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Abstract

The colloid cellular automata do not imitate the physical structure of colloids but are governed by logical functions derived from the colloids. We analyse the space-time complexity of Boolean circuits derived from the electrical responses of colloids: ZnO (zinc oxide, an inorganic compound also known as calamine or zinc white, which naturally occurs as the mineral zincite), proteinoids (microspheres and crystals of thermal abiotic proteins), and combinations thereof to electrical stimulation. To extract Boolean circuits from colloids, we send all possible configurations of two-, four-, and eight-bit binary strings, encoded as electrical potential values, to the colloids, record their responses, and thereby infer the Boolean functions they implement. We map the discovered functions onto the cell-state transition rules of cellular automata (arrays of binary state machines that update their states synchronously according to the same rule) -- the colloid cellular automata. We then analyse the phenomenology of the space-time configurations of the automata and evaluate their complexity using measures such as compressibility, Shannon entropy, Simpson diversity, and expressivity. A hierarchy of phenomenological and measurable space-time complexity is constructed.
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论胶体细胞自动机的复杂性
胶体细胞自动机并不模仿胶体的物理结构,而是受源自胶体的逻辑函数支配。我们分析了从胶体的电反应衍生出的布尔电路的时空复杂性:ZnO(氧化锌,一种无机化合物,又称炉甘石或锌白,天然存在于矿物锌矿中)、蛋白质(热非生物蛋白质的微球和晶体)以及它们对电刺激的组合。为了从胶体中提取布尔电路,我们向胶体发送编码为电势值的所有可能的两位、四位和八位二进制字符串配置,记录它们的反应,从而推断出它们实现的布尔函数。我们将发现的函数映射到细胞自动机(二进制状态机阵列,根据相同的规则同步更新其状态)--胶体细胞自动机的细胞状态转换规则上。Wethen 分析了自动机时空配置的现象学,并使用可压缩性、香农熵、辛普森多样性和表现力等指标评估了它们的复杂性。构建了现象学和可测量时空复杂性的层次结构。
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