Influence of Lipid Conformations on the Interaction Energy between a Membrane and a Peripheral Protein

IF 1.4 4区 物理与天体物理 Q3 PHYSICS, MULTIDISCIPLINARY JETP Letters Pub Date : 2024-06-04 DOI:10.1134/s0021364024600460
P. E. Volynsky, A. S. Alekseeva, I. A. Boldyrev
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Abstract

Peripheral membrane proteins are temporarily coupled to the surface of a membrane, penetrating into the lipid layer. In this work, it has been shown that the fraction of trans configurations of dihedral angles in hydrophobic chains of lipids decreases in the region of contact of peripheral membrane proteins with the membrane. This effect differs for different lipid chains and for dihedral angles at different distances from the beginning of a chain. A gosh configuration has a higher energy than a trans configuration. Consequently, the decrease in the fraction of trans configurations leads to an increase in the energy of the chain. The energy of chain conformations for the peripheral membrane protein considered in this work increases by ≈2 kJ/mol. A chain in chain conformations is involved in molecular mechanisms determining the elastic modulus of membranes. The energy stored in a conformation chain can be spent to the desorption of protein from the surface of the membrane and can be considered as a reason why the interaction of peripheral membrane proteins with the membrane is temporal.

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脂质构象对膜与外周蛋白相互作用能量的影响
外周膜蛋白与膜表面暂时耦合,渗入脂质层。这项研究表明,在外周膜蛋白与膜接触的区域,脂质疏水链中二面角反式构型的比例会降低。对于不同的脂质链和从链起点开始的不同距离上的二面角,这种效应是不同的。顺式构型的能量高于反式构型。因此,反式构型比例的减少会导致脂链能量的增加。本研究中考虑的外周膜蛋白的链构象能量增加了≈2 kJ/mol。链构象中的链参与了决定膜弹性模量的分子机制。构象链中储存的能量可用于蛋白质从膜表面解吸,这也是外周膜蛋白与膜的相互作用具有时间性的原因。
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来源期刊
JETP Letters
JETP Letters 物理-物理:综合
CiteScore
2.40
自引率
30.80%
发文量
164
审稿时长
3-6 weeks
期刊介绍: All topics of experimental and theoretical physics including gravitation, field theory, elementary particles and nuclei, plasma, nonlinear phenomena, condensed matter, superconductivity, superfluidity, lasers, and surfaces.
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