Network pharmacology combined with metabolomics to reveal the anti-fibrotic mechanism of Polygoni Orientalis Fructus in CCl4-induced hepatic fibrosis rats

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-06-13 DOI:10.1016/j.jprot.2024.105227
Lizhou Ma , Yu Chen , Rong Yue , Ziyu Li , Yibo Wang , Yanggang Bian , Miao Wang
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Abstract

Polygoni Orientalis Fructus (POF), a dried ripe fruit of Polygonum orientale L., is commonly used in China for liver disease treatment. However, its therapeutic mechanism remains unclear. The aim of this study was to elucidate the effects of POF on the regulation of endogenous metabolites and identify its key therapeutic targets in hepatic fibrosis (HF) rats by integrating network pharmacology and metabolomics approaches. First, serum liver indices and histopathological analyses were used to evaluate the therapeutic effects of POF on carbon tetrachloride (CCl4)-induced HF. Subsequently, differential metabolites and potential therapeutic targets of POF were screened using plasma metabolomics and network pharmacology, respectively. The key targets of POF were identified by overlapping differential metabolite-associated targets with the potential targets and validated by molecular docking and ELISA experiments. The results showed that POF effectively alleviated HF in rats. A total of 51 metabolites related to HF were screened, and 24 were associated with POF. 232 potential therapeutic targets were identified by network pharmacology analysis. Finally, six key targets were identified through a combined analysis. Furthermore, molecular docking and ELISA validation revealed that AGXT, PAH, and NOS3 are targets of POF action, while CBS, ALDH2, and ARG1 were identified as potential targets.

Significance

POF is now commonly used in the treatment of liver disease, but its mechanism of action remains unclear. Current studies on metabolomics of liver disease primarily focuse on the interpretation of differential metabolites and related metabolic pathways. This research delves into the intricate details of metabolomics findings via network pharmacology to uncover the targets and pathways of drug action.

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网络药理学结合代谢组学揭示何首乌在CCl4诱导的肝纤维化大鼠中的抗纤维化机制
何首乌(Polygoni Orientalis Fructus,POF)是何首乌的干燥成熟果实,在中国常用于治疗肝病。然而,其治疗机制仍不清楚。本研究旨在通过整合网络药理学和代谢组学方法,阐明POF对高频大鼠内源性代谢物的调控作用,并确定其关键治疗靶点。首先,利用血清肝脏指数和组织病理学分析评估POF对四氯化碳(CCl4)诱导的肝纤维化(HF)的治疗效果。随后,利用血浆代谢物和网络药理学分别确定了 POF 的差异代谢物和潜在治疗靶点。通过差异代谢物相关靶点与潜在靶点的重叠,确定了POF的关键靶点,并通过分子对接和ELISA进行了验证。结果表明,POF能有效缓解大鼠高血脂症。共筛选出51种与HF相关的代谢物,其中24种与POF相关。通过网络药理学分析,确定了232个潜在治疗靶点。最后,通过综合分析确定了六个关键靶点。此外,分子对接和酶联免疫吸附验证显示,AGXT、PAH 和 NOS3 是 POF 的作用靶点,而 CBS、ALDH2 和 ARG1 被确定为潜在靶点。意义:POF 目前已被普遍用于治疗肝病,但其作用机制仍不清楚。目前有关肝病代谢组学的研究主要集中在对不同代谢物和相关代谢途径的解读上。本研究通过网络药理学深入研究代谢组学发现的复杂细节,以揭示药物作用的靶点和途径。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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