Identification of hepatic steatosis among persons with and without HIV using natural language processing.

IF 8.3 2区 材料科学 Q1 MATERIALS SCIENCE, MULTIDISCIPLINARY ACS Applied Materials & Interfaces Pub Date : 2024-06-19 eCollection Date: 2024-07-01 DOI:10.1097/HC9.0000000000000468
Jessie Torgersen, Melissa Skanderson, Farah Kidwai-Khan, Dena M Carbonari, Janet P Tate, Lesley S Park, Debika Bhattacharya, Joseph K Lim, Tamar H Taddei, Amy C Justice, Vincent Lo Re
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Abstract

Background: Steatotic liver disease (SLD) is a growing phenomenon, and our understanding of its determinants has been limited by our ability to identify it clinically. Natural language processing (NLP) can potentially identify hepatic steatosis systematically within large clinical repositories of imaging reports. We validated the performance of an NLP algorithm for the identification of SLD in clinical imaging reports and applied this tool to a large population of people with and without HIV.

Methods: Patients were included in the analysis if they enrolled in the Veterans Aging Cohort Study between 2001 and 2017, had an imaging report inclusive of the liver, and had ≥2 years of observation before the imaging study. SLD was considered present when reports contained the terms "fatty," "steatosis," "steatotic," or "steatohepatitis." The performance of the SLD NLP algorithm was compared to a clinical review of 800 reports. We then applied the NLP algorithm to the first eligible imaging study and compared patient characteristics by SLD and HIV status.

Results: NLP achieved 100% sensitivity and 88.5% positive predictive value for the identification of SLD. When applied to 26,706 eligible Veterans Aging Cohort Study patient imaging reports, SLD was identified in 72.2% and did not significantly differ by HIV status. SLD was associated with a higher prevalence of metabolic comorbidities, alcohol use disorder, and hepatitis B and C, but not HIV infection.

Conclusions: While limited to those undergoing radiologic study, the NLP algorithm accurately identified SLD in people with and without HIV and offers a valuable tool to evaluate the determinants and consequences of hepatic steatosis.

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利用自然语言处理技术识别艾滋病病毒感染者和非艾滋病病毒感染者的肝脂肪变性。
背景:脂肪性肝病(SLD)是一种日益严重的现象,而我们对其决定因素的了解一直受到临床识别能力的限制。自然语言处理(NLP)有可能在大型临床影像报告库中系统地识别肝脂肪变性。我们验证了在临床影像报告中识别 SLD 的 NLP 算法的性能,并将该工具应用于大量艾滋病毒感染者和非艾滋病毒感染者:如果患者在 2001 年至 2017 年间参加了退伍军人老龄队列研究(Veterans Aging Cohort Study),有包括肝脏在内的成像报告,并且在成像研究前有≥2 年的观察期,则纳入分析。如果报告中包含 "脂肪"、"脂肪变性"、"脂肪肝 "或 "脂肪性肝炎 "等术语,则认为存在 SLD。我们将 SLD NLP 算法的性能与 800 份报告的临床审查结果进行了比较。然后,我们将 NLP 算法应用于第一项符合条件的成像研究,并按 SLD 和 HIV 状态比较了患者特征:结果:NLP 在识别 SLD 方面达到了 100% 的灵敏度和 88.5% 的阳性预测值。当应用于 26706 份符合条件的退伍军人老龄队列研究患者影像学报告时,72.2% 的患者被识别出 SLD,且与 HIV 感染状况无显著差异。SLD与代谢合并症、酒精使用障碍、乙型肝炎和丙型肝炎的发病率较高有关,但与HIV感染无关:虽然 NLP 算法仅限于接受放射学研究的人群,但它能准确识别出艾滋病毒感染者和非艾滋病毒感染者中的 SLD,并为评估肝脂肪变性的决定因素和后果提供了有价值的工具。
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来源期刊
ACS Applied Materials & Interfaces
ACS Applied Materials & Interfaces 工程技术-材料科学:综合
CiteScore
16.00
自引率
6.30%
发文量
4978
审稿时长
1.8 months
期刊介绍: ACS Applied Materials & Interfaces is a leading interdisciplinary journal that brings together chemists, engineers, physicists, and biologists to explore the development and utilization of newly-discovered materials and interfacial processes for specific applications. Our journal has experienced remarkable growth since its establishment in 2009, both in terms of the number of articles published and the impact of the research showcased. We are proud to foster a truly global community, with the majority of published articles originating from outside the United States, reflecting the rapid growth of applied research worldwide.
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