Peripheral Blood miRNA Expression in Patients with Essential Hypertension in the Han Chinese Population in Hefei, China.

IF 2.1 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Genetics Pub Date : 2024-06-21 DOI:10.1007/s10528-024-10867-6
Bin Cheng, Ronglu Yang, Hui Xu, Li Wang, Nan Jiang, Tingting Song, Changwu Dong
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Abstract

Primary hypertension is a significant risk factor for cardiovascular diseases. However, the pathogenesis of primary hypertension involves multiple biological processes, including the nervous system, circulatory system, endocrine system, and more. Despite extensive research, there is no clear understanding of the regulatory mechanism underlying its pathogenesis. In recent years, miRNAs have gained attention as a regulatory factor capable of modulating the expression of related molecules through gene silencing. Therefore, exploring differentially expressed miRNAs in patients with essential hypertension (EH) may offer a novel approach for future diagnosis and treatment of EH. This study included a total of twenty Han Chinese population samples from Hefei, China. The samples consisted of 10 healthy individuals and 10 patients with EH. Statistical analysis was conducted to analyze the general information of the two-sample groups. High-throughput sequencing and base identification were performed to obtain the original sequencing sequences. These sequences were then annotated using various databases including Rfam, cDNA sequences, species repetitive sequences library, and miRBase database. The number of miRNA species contained in the samples was measured. Next, TPM values were calculated to determine the expression level of each miRNA. The bioinformatics of the differentiated miRNAs were analyzed using the OECloud tool, and RPM values were calculated. Furthermore, the reliability of the expression was analyzed by calculating the area under the Roc curve using the OECloud tools. Statistical analysis revealed no significant differences between the two samples in terms of age distribution, gender composition, smoking history, and alcohol consumption history (P > 0.05). However, there was a notable presence of family genetic history and high BMI in the EH population (P < 0.05). The sequencing results identified a total of 245 miRNAs, out of which 16 miRNAs exhibited differential expression. Among the highly expressed miRNAs were let-7d-5p, miR-101-3p, miR-122-5p, miR-122b-3p, miR-192-5p, and miR-6722-3p. On the other hand, the lowly expressed miRNAs included miR-103a-3p, miR-16-5p, miR-181a-2-3p, miR-200a-3p, miR-200b-3p, miR-200c-3p, miR-221-3p, miR-30d-5p, miR-342-5p, and miR-543. This study initially identified 16 miRNAs that are aberrantly expressed and function in various processes associated with the onset and progression of essential hypertension. These miRNAs have the potential to be targeted for future diagnosis and treatment of EH. However, further samples are required to provide additional support for this study.

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中国合肥汉族人群中重度高血压患者外周血 miRNA 的表达。
原发性高血压是心血管疾病的重要危险因素。然而,原发性高血压的发病机制涉及神经系统、循环系统、内分泌系统等多个生物过程。尽管进行了广泛的研究,但对其发病机制的调控机制尚无明确的认识。近年来,miRNA 作为一种能够通过基因沉默调节相关分子表达的调控因子受到关注。因此,探究本质性高血压(EH)患者体内不同表达的 miRNAs 可为未来诊断和治疗 EH 提供新的方法。本研究共纳入了 20 份来自中国合肥的汉族人群样本。样本包括 10 名健康人和 10 名高血压患者。研究人员对两组样本的一般信息进行了统计分析。通过高通量测序和碱基识别获得原始测序序列。然后利用各种数据库(包括 Rfam、cDNA 序列、物种重复序列库和 miRBase 数据库)对这些序列进行注释。测量样本中所含 miRNA 物种的数量。然后计算 TPM 值,以确定每种 miRNA 的表达水平。使用 OECloud 工具分析已分化 miRNA 的生物信息学,并计算 RPM 值。此外,还利用 OECloud 工具计算了 Roc 曲线下的面积,从而分析了表达的可靠性。统计分析显示,两个样本在年龄分布、性别构成、吸烟史和饮酒史方面没有明显差异(P > 0.05)。然而,EH 群体中存在明显的家族遗传史和高体重指数(P
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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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