Structural analysis of the FERM domain of human protein tyrosine phosphatase non-receptor type 21

IF 1.1 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Acta crystallographica. Section F, Structural biology communications Pub Date : 2024-07-03 DOI:10.1107/S2053230X24005260
Hye Seon Lee, Bonsu Ku, Ho-Cheol Shin, Seung Jun Kim
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Abstract

Protein tyrosine phosphatase non-receptor type 21 (PTPN21) is a cytosolic protein tyrosine phosphatase that regulates cell growth and invasion. Due to its oncogenic properties, PTPN21 has recently emerged as a potential therapeutic target for cancer. In this study, the three-dimensional structure of the PTPN21 FERM domain was determined at 2.1 Å resolution by X-ray crystallography. The crystal structure showed that this domain harbors canonical FERM folding and consists of three subdomains that are tightly packed via highly conserved intramolecular hydrophobic interactions. Consistent with this, the PTPN21 FERM domain shares high structural homology with several other FERM domains. Moreover, structural superimposition demonstrated two putative protein-binding sites of the PTPN21 FERM domain, which are presumed to be associated with interaction with its binding partner, kinesin family member 1C. Thus, these data suggest that the FERM domain of PTPN21 serves as a module that mediates protein–protein interaction, like other FERM domains.

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人类非受体 21 型蛋白酪氨酸磷酸酶 FERM 结构域的结构分析。
非受体21型蛋白酪氨酸磷酸酶(PTPN21)是一种细胞膜蛋白酪氨酸磷酸酶,能调节细胞的生长和侵袭。由于其致癌特性,PTPN21 近来已成为癌症的潜在治疗靶点。本研究通过 X 射线晶体学方法,以 2.1 Å 的分辨率测定了 PTPN21 FERM 结构域的三维结构。晶体结构显示,该结构域具有典型的 FERM 折叠结构,由三个亚域组成,这三个亚域通过高度保守的分子内疏水相互作用紧密地结合在一起。与此相一致,PTPN21 FERM 结构域与其他几个 FERM 结构域具有高度的结构同源性。此外,结构叠加显示了 PTPN21 FERM 结构域的两个假定蛋白质结合位点,推测这两个位点与其结合伙伴驱动蛋白家族成员 1C 的相互作用有关。因此,这些数据表明,PTPN21 的 FERM 结构域与其他 FERM 结构域一样,是介导蛋白质-蛋白质相互作用的模块。
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来源期刊
Acta crystallographica. Section F, Structural biology communications
Acta crystallographica. Section F, Structural biology communications BIOCHEMICAL RESEARCH METHODSBIOCHEMISTRY &-BIOCHEMISTRY & MOLECULAR BIOLOGY
CiteScore
1.90
自引率
0.00%
发文量
95
期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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