Small molecule probes for peroxynitrite detection

{"title":"Small molecule probes for peroxynitrite detection","authors":"","doi":"10.1016/j.rbc.2024.100034","DOIUrl":null,"url":null,"abstract":"<div><p>Peroxynitrite (ONOO<sup>−</sup>/ONOOH) is a short-lived but highly reactive species that is formed in the diffusion-controlled reaction between nitric oxide and the superoxide radical anion. It can oxidize certain biomolecules and has been considered as a key cellular oxidant formed under various pathophysiological conditions. It is crucial to selectively detect and quantify ONOO<sup>−</sup> to determine its role in biological processes. In this review, we discuss various approaches used to detect ONOO<sup>−</sup> in cell-free and cellular systems with the major emphasis on small-molecule chemical probes. We review the chemical principles and mechanisms responsible for the formation of the detectable products, and plausible limitations of the probes. We recommend the use of boronate-based chemical probes for ONOO<sup>−</sup>, as they react directly and rapidly with ONOO<sup>−</sup>, they produce minor but ONOO<sup>−</sup>‒specific products, and the reaction kinetics and mechanism have been rigorously characterized. Specific experimental approaches and protocols for the detection of ONOO<sup>−</sup> in cell-free, cellular, and <em>in vivo</em> systems using boronate-based molecular probes are provided (as shown in Boxes 1-6).</p></div>","PeriodicalId":101065,"journal":{"name":"Redox Biochemistry and Chemistry","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2773176624000154/pdfft?md5=a4723535d75e5476ac6136a1e8cdeac7&pid=1-s2.0-S2773176624000154-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Redox Biochemistry and Chemistry","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2773176624000154","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
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Abstract

Peroxynitrite (ONOO/ONOOH) is a short-lived but highly reactive species that is formed in the diffusion-controlled reaction between nitric oxide and the superoxide radical anion. It can oxidize certain biomolecules and has been considered as a key cellular oxidant formed under various pathophysiological conditions. It is crucial to selectively detect and quantify ONOO to determine its role in biological processes. In this review, we discuss various approaches used to detect ONOO in cell-free and cellular systems with the major emphasis on small-molecule chemical probes. We review the chemical principles and mechanisms responsible for the formation of the detectable products, and plausible limitations of the probes. We recommend the use of boronate-based chemical probes for ONOO, as they react directly and rapidly with ONOO, they produce minor but ONOO‒specific products, and the reaction kinetics and mechanism have been rigorously characterized. Specific experimental approaches and protocols for the detection of ONOO in cell-free, cellular, and in vivo systems using boronate-based molecular probes are provided (as shown in Boxes 1-6).

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用于检测过亚硝酸盐的小分子探针
亚硝酸过氧化物(ONOO-/ONOOH)是一氧化氮与超氧自由基阴离子在扩散控制反应中形成的一种寿命短但活性高的物质。它能氧化某些生物大分子,被认为是在各种病理生理条件下形成的一种关键细胞氧化剂。选择性地检测和量化 ONOO-,对确定其在生物过程中的作用至关重要。在这篇综述中,我们将讨论用于检测无细胞和细胞系统中 ONOO- 的各种方法,重点是小分子化学探针。我们回顾了形成可检测产物的化学原理和机制,以及探针可能存在的局限性。我们建议使用基于硼酸盐的化学探针来检测 ONOO-,因为它们能直接、快速地与 ONOO-发生反应,产生少量但具有 ONOO-特异性的产物,而且反应动力学和机理已得到严格表征。本文提供了使用硼酸盐分子探针在无细胞、细胞和体内系统中检测 ONOO- 的具体实验方法和方案(如方框 1-6 所示)。
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