Similarity of Human Mitochondrial DNA Nucleotide Substitution Spectra Reconstructed over One and Many Generations

IF 0.6 4区 生物学 Q4 GENETICS & HEREDITY Russian Journal of Genetics Pub Date : 2024-08-23 DOI:10.1134/s1022795424700583
B. A. Malyarchuk
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Abstract—Using phylogenetic analysis of mitochondrial whole genome nucleotide sequences (mtDNA), which allows the study of genetic changes over many generations, a spectrum of nucleotide substitutions (along the L-strand of mtDNA) was reconstructed in European populations. The spectra of mtDNA nucleotide substitutions observed in a heteroplasmic state (at the ≥1 and ≥5% levels) in first generation children were also analyzed. It was found that the spectra of nucleotide substitutions reconstructed over one and many generations practically do not differ in their main parameters: the distribution of pyrimidine and purine substitutions (with predominance of T→C transitions) and the ratio of the number of transitions and transversions. Analysis of the phylogenetic tree of mtDNA haplotypes in Europeans clearly revealed the influence of negative (purifying) selection on mitochondrial gene pools. It is suggested that the selective processes guiding the mtDNA evolution in one and many generations are of a similar nature, i.e., are caused by negative selection. The problem of how mutations occur and spread in mitochondria of germ line cells is discussed.

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重建的人类线粒体 DNA 核苷酸替换谱系在一代和多代之间的相似性
摘要-通过对线粒体全基因组核苷酸序列(mtDNA)进行系统发育分析,可以研究多代人的遗传变化,从而重建欧洲人群(沿 mtDNA L 链)的核苷酸替换谱。此外,还分析了在第一代儿童中观察到的异质体状态下(≥1%和≥5%水平)的mtDNA核苷酸替换谱。结果发现,经过一代和多代重建的核苷酸替换谱在主要参数上几乎没有差异:嘧啶和嘌呤替换的分布(以T→C转换为主),以及转换和反转的数量比。对欧洲人 mtDNA 单倍型系统发生树的分析清楚地揭示了负向(净化)选择对线粒体基因库的影响。有人认为,指导 mtDNA 一代和多代进化的选择过程具有相似的性质,即由负选择引起。讨论了突变如何在种系细胞线粒体中发生和传播的问题。
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来源期刊
Russian Journal of Genetics
Russian Journal of Genetics 生物-遗传学
CiteScore
1.00
自引率
33.30%
发文量
126
审稿时长
1 months
期刊介绍: Russian Journal of Genetics is a journal intended to make significant contribution to the development of genetics. The journal publishes reviews and experimental papers in the areas of theoretical and applied genetics. It presents fundamental research on genetic processes at molecular, cell, organism, and population levels, including problems of the conservation and rational management of genetic resources and the functional genomics, evolutionary genomics and medical genetics.
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