Identification of novel bovine leukocyte antigen alleles and association of BoLA-DRB3.2*020:02:01 with resistance to Theileria orientalis infection in crossbred Kedah-Kelantan cattle: a pilot study.

IF 1.7 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Tropical animal health and production Pub Date : 2024-09-24 DOI:10.1007/s11250-024-04138-0
Onyinyechukwu Ada Agina, Mohd Rosly Shaari, Nur Mahiza Md Isa, Mokrish Ajat, Mohd Zamri-Saad, Hazilawati Hamzah
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Abstract

The bovine leukocyte antigen (BoLA) gene is a significant genetic part of the immune system and has been used as a disease marker in cattle. In this study, we detected Theileria orientalis, T. sinensis, Anaplasma marginale, Anaplasma platys, Candidatus Mycoplasma haemobos and Trypanosoma evansi by PCR amplification and sequencing of the amplicons. The allelic association of the BoLA-DRB3.2 gene with blood pathogen disease resistance and susceptibility in 87 Kedah-Kelantan x Brahman (KKB) and 38 Bali cattle was determined by Fisher's exact test and Cochran Mantel Haenszel (CMH) correction test. Sequence-based typing of the BoLA-DRB3.2 gene identified 43 alleles (27 previously reported alleles and 16 novel alleles) across the two cattle breeds. Alignment analysis of the 16 novel alleles revealed 90.7-95.8% and 85-92% nucleotide and amino acid identities, with the reference allele, BoLA-DRB3*016:01 cDNA clone NR-1. BoLA-DRB3*009:02 (25.6%) and BoLA-DRB3*036:01 (36%) were the most frequent alleles in KKB and Bali cattle, respectively. In KKB cattle, BoLA-DRB3*020:02:01 was significantly associated with resistance to T. orientalis whereas *007:01 and *009:02 were significantly associated with resistance to C. Mycoplasma haemobos. Also, DRB3*017:01 was associated with susceptibility to T. orientalis in KKB cattle. In the Bali cattle, BoLA-DRB3*015:01 was found to be a genetic marker of susceptibility to C. Mycoplasma haemobos infection. Therefore, this study identified BoLA-DRB3.2 alleles associated with resistance and susceptibility to T. orientalis infection in KKB cattle and susceptibility to C. Mycoplasma haemobos infection in Bali cattle for the first time. Therefore, this study suggests that these BoLA-DRB3 resistance alleles could be used as candidate markers for selection, whereas susceptibility alleles could be used as candidate markers for culling in the beef industry.

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鉴定新型牛白细胞抗原等位基因以及 BoLA-DRB3.2*020:02:01 与吉打-吉兰丹杂交牛抗东方丝虫病感染的关系:一项试点研究。
牛白细胞抗原(BoLA)基因是免疫系统的重要遗传部分,已被用作牛的疾病标记物。在本研究中,我们通过 PCR 扩增和扩增子测序检测了东方丝虫、中华丝虫、边缘疟原虫、板疟原虫、血型支原体和 evansi 锥虫。通过费雪精确检验和 Cochran Mantel Haenszel(CMH)校正检验,确定了 BoLA-DRB3.2 基因与 87 头吉打-吉兰丹 x 婆罗门(KKB)牛和 38 头巴厘牛的血液病原体抗病性和易感性的等位基因关联。基于序列的 BoLA-DRB3.2 基因分型在两个牛种中发现了 43 个等位基因(27 个先前报告的等位基因和 16 个新型等位基因)。16 个新型等位基因的比对分析表明,它们与参考等位基因 BoLA-DRB3*016:01 cDNA 克隆 NR-1 的核苷酸和氨基酸相同度分别为 90.7%-95.8%和 85%-92%。BoLA-DRB3*009:02 (25.6%) 和 BoLA-DRB3*036:01 (36%) 分别是 KKB 牛和巴厘岛牛中最常见的等位基因。在 KKB 牛中,BoLA-DRB3*020:02:01 与对 T. orientalis 的抗性显著相关,而 *007:01 和 *009:02 则与对 C. Mycoplasma haemobos 的抗性显著相关。此外,在 KKB 牛中,DRB3*017:01 与对 T. orientalis 的易感性有关。在巴厘岛牛中,BoLA-DRB3*015:01 被发现是血型支原体感染易感性的遗传标记。因此,本研究首次发现了 BoLA-DRB3.2 等位基因与 KKB 牛的抗性和易感性以及巴厘岛牛对血型支原体感染的易感性有关。因此,这项研究表明,这些 BoLA-DRB3 抗性等位基因可作为候选标记用于选择,而易感性等位基因则可作为候选标记用于肉牛业的淘汰。
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来源期刊
Tropical animal health and production
Tropical animal health and production 农林科学-兽医学
CiteScore
3.40
自引率
11.80%
发文量
361
审稿时长
6-12 weeks
期刊介绍: Tropical Animal Health and Production is an international journal publishing the results of original research in any field of animal health, welfare, and production with the aim of improving health and productivity of livestock, and better utilisation of animal resources, including wildlife in tropical, subtropical and similar agro-ecological environments.
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