Uncovering the fragmentation and separation characteristics of sophorolipid biosurfactants with LC-MS-ESI.

IF 3.2 4区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Journal of Industrial Microbiology & Biotechnology Pub Date : 2024-01-09 DOI:10.1093/jimb/kuae035
Benjamin Ingham, Katherine Hollywood, Phavit Wongsirichot, Alistair Veitch, James Winterburn
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Abstract

The application of liquid chromatography and mass spectrometry (MS) is a challenging area of research for structural identification of sophorolipids, owing to the large number of possible variations in structure and limited knowledge on the separation and fragmentation characteristics of the variants. The aims of this work was to provide a comprehensive analysis of the expected characteristics and fragmentation patterns of a wide range of sophorolipid biosurfactant congeners, providing a methodology and process alongside freely available data to inform and enable future research of commercial or novel sophorolipids. Samples of acidic and lactonic sophorolipid standards were tested using reverse-phase ultra-high performance liquid chromatography and identified using electrospray ionization MS. 37 sophorolipid variants were identified and compared for their elution order and fragmentation pattern under MS/MS. The retention time of sophorolipids was increased by the presence of lactonization, unsaturation, chain length, and acetylation as hydrophobic interactions with the C18 stationary phase increased. A key finding that acidic forms can elute later than lactonic variants was obtained when the fatty acid length and unsaturation and acetylation are altered, in contradiction to previous literature statements. Fragmentation pathways were determined for lactonic and acidic variants under negative [M-H]- and positive [M+NH4]+ ionization, and unique patterns/pathways were identified to help determine the structural components present. The first publicly available database of chromatograms and MS2 spectra has been made available to aid in the identification of sophorolipid components and provide a reliable dataset to accelerate future research into novel sophorolipids and shorten the time to innovation.

One-sentence summary: This article describes the process and challenges in identifying different structures of eco-friendly biosurfactants, providing a novel database to compare results.

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利用 LC-MS-ESI 发现槐脂类生物表面活性剂的碎裂和分离特征。
液相色谱法和质谱法的应用是槐脂结构鉴定的一个具有挑战性的研究领域,原因是结构可能存在大量变异,而对变体的分离和碎片特征了解有限。这项工作的目的是全面分析各种槐脂类生物表面活性剂同系物的预期特征和碎裂模式,提供一种方法和流程以及免费提供的数据,为今后研究商业或新型槐脂类提供信息和帮助。酸性和乳酸型槐脂标准样品采用反相超高效液相色谱法进行检测,并采用电喷雾离子化质谱法进行鉴定。随着与 C18 固定相疏水作用的增加,内酯化、不饱和、链长和乙酰化的存在延长了槐脂的保留时间。一个重要发现是,当脂肪酸长度、不饱和度和乙酰化发生变化时,酸性形式的洗脱时间会晚于乳酸变体,这与之前的文献陈述相矛盾。在负[M-H]-和正[M+NH4]+离子化条件下,确定了乳酸和酸性变体的碎片路径,并确定了独特的模式/路径,以帮助确定存在的结构成分。首个公开可用的色谱和 MS2 图谱数据库已经可用来帮助鉴定槐脂成分,并提供可靠的数据集,以加速未来对新型槐脂的研究,缩短创新时间。
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来源期刊
Journal of Industrial Microbiology & Biotechnology
Journal of Industrial Microbiology & Biotechnology 工程技术-生物工程与应用微生物
CiteScore
7.70
自引率
0.00%
发文量
25
审稿时长
3 months
期刊介绍: The Journal of Industrial Microbiology and Biotechnology is an international journal which publishes papers describing original research, short communications, and critical reviews in the fields of biotechnology, fermentation and cell culture, biocatalysis, environmental microbiology, natural products discovery and biosynthesis, marine natural products, metabolic engineering, genomics, bioinformatics, food microbiology, and other areas of applied microbiology
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