A comprehensive molecular phylogeny of the genus Sylvirana (Anura: Ranidae) highlights unrecognized diversity, revised classification and historical biogeography.

IF 3.6 1区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Phylogenetics and Evolution Pub Date : 2024-10-29 DOI:10.1016/j.ympev.2024.108223
Yun-He Wu, Man-Hao Xu, Chatmongkon Suwannapoom, Sang Ngoc Nguyen, Robert W Murphy, Theodore J Papenfuss, Amy Lathrop, Felista Kasyoka Kilunda, Wei Gao, Zhi-Yong Yuan, Jin-Min Chen, Liang Zhang, Hai-Peng Zhao, Li-Jun Wang, Md Mizanur Rahman, Lotanna Micah Nneji, Gui-Gang Zhao, Yun-Yu Wang, Jie-Qiong Jin, Peng Zhang, Jing Che
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Abstract

The genus Sylvirana includes 12 species widely distributed in South China and Southeast Asia. The phylogenetic relationships and species diversity for Sylvirana and allied genera remain unresolved and controversial due to insufficient data and incomplete taxon sampling. Using a combined dataset of mitochondrial genes (16S and COI) and 101 nuclear genes obtained through the amplicon sequence capture approach, we generated the most comprehensive phylogenetic analysis for the genus Sylvirana to date, inferring diversity, phylogenetic relationships, and historical biogeography with unprecedented levels of taxon and geographic sampling. Our results conservatively reveal six undescribed species, mostly distributed in peninsular Indochina. Phylogenetic analyses strongly support the non-monophyly of Sylvirana with respect to Pterorana. Additionally, phylogenetic results place Sylvirana guentheri and Pelophylax lateralis into genus Humerana, supporting the inclusion of Hylarana latouchii, Papurana milleti, and Hylarana attigua within Pterorana + Sylvirana. The long-disputed species of Hylarana bannanica (previously Sylvirana) cluster with genus Papurana. Because the results of multiple non-monophyletic genera create taxonomic confusion, we suggest relegating all genera to subgenus rank of Hylarana. Sylvirana is a junior synonym of the Pterorana. Biogeographically, we trace the origin of Pterorana to Southeast Asia during the early Miocene, with subsequent dispersal thereafter. Our study shows that climatic changes may have profoundly influenced the diversification of Pterorana during the Miocene.

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Sylvirana 属(Anura: Ranidae)的综合分子系统发育突显了尚未认识到的多样性、修订的分类和历史生物地理学。
Sylvirana 属包括 12 个种,广泛分布于华南和东南亚地区。由于数据不足和类群取样不完整,Sylvirana 属及其同属的系统发育关系和物种多样性仍未得到解决并存在争议。我们利用线粒体基因(16S 和 COI)和通过扩增子序列捕获方法获得的 101 个核基因的组合数据集,对 Sylvirana 属进行了迄今为止最全面的系统发育分析,以前所未有的分类群和地理取样水平推断了其多样性、系统发育关系和历史生物地理学。我们的结果保守地揭示了六个未描述的物种,它们大多分布在印度支那半岛。系统发育分析有力地支持了 Sylvirana 与 Pterorana 的非单系关系。此外,系统发育结果将 Sylvirana guentheri 和 Pelophylax lateralis 归入 Humerana 属,支持将 Hylarana latouchii、Papurana milleti 和 Hylarana attigua 纳入 Pterorana + Sylvirana 属。争议已久的 Hylarana bannanica(以前为 Sylvirana)与 Papurana 属聚类。由于多个非单系属的结果造成了分类学上的混乱,我们建议将所有属归入 Hylarana 亚属。Sylvirana 是 Pterorana 的初级异名。在生物地理学上,我们追溯到 Pterorana 在中新世早期起源于东南亚,随后扩散到世界各地。我们的研究表明,气候的变化可能对中新世期间翼手目的多样化产生了深远的影响。
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来源期刊
Molecular Phylogenetics and Evolution
Molecular Phylogenetics and Evolution 生物-进化生物学
CiteScore
7.50
自引率
7.30%
发文量
249
审稿时长
7.5 months
期刊介绍: Molecular Phylogenetics and Evolution is dedicated to bringing Darwin''s dream within grasp - to "have fairly true genealogical trees of each great kingdom of Nature." The journal provides a forum for molecular studies that advance our understanding of phylogeny and evolution, further the development of phylogenetically more accurate taxonomic classifications, and ultimately bring a unified classification for all the ramifying lines of life. Phylogeographic studies will be considered for publication if they offer EXCEPTIONAL theoretical or empirical advances.
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