Analysis of hsa_circ_0136256 as a biomarker for fibrosis in systemic sclerosis.

IF 3.5 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY BMC Biotechnology Pub Date : 2024-11-13 DOI:10.1186/s12896-024-00910-0
Xiaolin Sun, Baoyue Wang, Lili Ding, Yongfu Wang, Mingguo Xu
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Abstract

Background: Exploration of whether circRNAs in the skin of systemic sclerosis (SSc) model mice interact with 4E-BP1 protein to mediate the mTOR signaling pathway to regulate SSc fibrosis is crucial to identify homologous human circRNAs as markers to guide the diagnosis and treatment of SSc.

Methods: C57BL/6 mice aged 6-8 weeks and weighing approximately 20 g were subcutaneously injected with bleomycin (BLM) to establish an SSc model. High-throughput sequencing was used to screen the differentially expressed circRNA in the skin of SSc model mice and control mice. RNA immunoprecipitation and RNA pulldown confirmed the interaction between circRNA and 4E-BP1 protein. SSc model mice were treated with empty plasmid (OE-NC), overexpression plasmid of mmu_circ_0005372 (OE-circ_0005372), interference plasmid of mmu_circ_0005372 (sh-circ5372), mutant plasmid of mmu_circ_0005372 (circ5372-MT), mTOR activator (MHY1485), mTOR inhibitor (omipalisib), or JAK1/2 inhibitor (ruxolitinib). Sections of mouse skin tissue were stained with Hematoxylin and eosin and Masson's stain. The collagen volume fraction (CVF) was calculated as CVF = area of blue collagen/total area with ImageJ. The correlation between homologous human circRNAs and clinical data was analyzed.

Results: Compared to the control group, 21,839 circRNAs were upregulated and 27, 946 circRNAs were downregulated in the skin tissue of mice in the SSc model group. Among them was mmu_circ_0005372, which is derived from the FZD3 gene, is closely related to fibrosis, and is involved in the mTOR signaling pathway. Hsa_circ_0136256 was identified as the homologous human circRNA of mmu_circ_0005372. RT-qPCR confirmed that the expression of mmu_circ_0005372 was significantly reduced in the skin tissue of SSc mice, and the expression of hsa_circ_0136256 was significantly reduced in the peripheral blood mononuclear cells of patients with SSc. The interaction between mmu_circ_0005372 and 4E-BP1 protein was inhibited in the skin tissue of SSc model mice. The results showed that the CVF of OE-circ_0005372 group was significantly lower than that of the sh-circ5372, circ5372-MT, and MHY1485 groups, indicating that OE-circ5372 significantly improved skin fibrosis in the SSc mice. ROC curve analysis was performed on hsa_circ_0136256 (AUC = 0.719, P = 0.035). The expression of hsa_circ_0136256 was negatively correlated with COL IV, RDW-SD, and RDW-CV, and positively correlated with VC, PLT, and PCT. The results suggested that hsa_circ_0136256 may have important roles in the clinical diagnosis of SSc.

Conclusion: Mmu_circ_0005372 and homologous human hsa_circ_0136256 may be biomarkers and therapeutic targets for SSc fibrosis.

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分析作为系统性硬化症纤维化生物标志物的 hsa_circ_0136256。
背景:探索系统性硬化症(SSc)模型小鼠皮肤中的circRNA是否与4E-BP1蛋白相互作用,介导mTOR信号通路以调控SSc纤维化,这对于确定同源的人类circRNA作为指导SSc诊断和治疗的标志物至关重要:方法:对年龄为6-8周、体重约20克的C57BL/6小鼠皮下注射博莱霉素(BLM),建立SSc模型。采用高通量测序筛选SSc模型小鼠和对照小鼠皮肤中差异表达的circRNA。RNA免疫沉淀和RNA pulldown证实了circRNA与4E-BP1蛋白之间的相互作用。用空质粒(OE-NC)、mmu_circ_0005372的过表达质粒(OE-circ_0005372)、mmu_circ_0005372的干扰质粒(sh-circ5372)、mmu_circ_0005372的突变质粒(circ5372-MT)、mTOR激活剂(MHY1485)、mTOR抑制剂(奥米帕利西)或JAK1/2抑制剂(鲁索利替尼)处理SSc模型小鼠。小鼠皮肤组织切片用苏木精、伊红和马森氏染色法染色。胶原体积分数(CVF)用ImageJ计算,即CVF=蓝色胶原面积/总面积。分析了同源人类 circRNA 与临床数据之间的相关性:结果:与对照组相比,SSc模型组小鼠皮肤组织中有21839个circRNA上调,27946个circRNA下调。其中 mmu_circ_0005372 源自 FZD3 基因,与纤维化密切相关,参与 mTOR 信号通路。Hsa_circ_0136256 被鉴定为 mmu_circ_0005372 的同源人类 circRNA。RT-qPCR 证实,在 SSc 小鼠的皮肤组织中,mmu_circ_0005372 的表达明显降低,而在 SSc 患者的外周血单核细胞中,hsa_circ_0136256 的表达也明显降低。在 SSc 模型小鼠的皮肤组织中,mmu_circ_0005372 与 4E-BP1 蛋白的相互作用受到抑制。结果显示,OE-circ_0005372 组的 CVF 明显低于 sh-circ5372、circ5372-MT 和 MHY1485 组,表明 OE-circ5372 能显著改善 SSc 小鼠的皮肤纤维化。对 hsa_circ_0136256 进行了 ROC 曲线分析(AUC = 0.719,P = 0.035)。hsa_circ_0136256 的表达与 COL IV、RDW-SD 和 RDW-CV 呈负相关,与 VC、PLT 和 PCT 呈正相关。结果表明,hsa_circ_0136256在SSc的临床诊断中可能具有重要作用:结论:Mmu_circ_0005372 和同源人类 hsa_circ_0136256 可能是 SSc 纤维化的生物标志物和治疗靶点。
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来源期刊
BMC Biotechnology
BMC Biotechnology 工程技术-生物工程与应用微生物
CiteScore
6.60
自引率
0.00%
发文量
34
审稿时长
2 months
期刊介绍: BMC Biotechnology is an open access, peer-reviewed journal that considers articles on the manipulation of biological macromolecules or organisms for use in experimental procedures, cellular and tissue engineering or in the pharmaceutical, agricultural biotechnology and allied industries.
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