A new approach to assess post-mortem interval: A machine learning-assisted label-free ATR-FTIR analysis of human vitreous humor

Valentina Notarstefano , Chiara Santoni , Eva Montanari , Francesco Paolo Busardò , Angelo Montana , Giulia Orilisi , Paolo Mariani , Elisabetta Giorgini
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Abstract

A crucial issue in forensics is determining the post-mortem interval (PMI), the time between death and the finding of a body. Despite various methods already employed for its estimation, only approximate values are currently achievable. Vitreous humor (VH) is an avascular tissue between the lens and the retina, mainly composed by a collagen fibers network, hyaluronic acid, and hyalocytes. Recently, it has received interest in forensic medicine, being easy to collect and susceptible to low microbiological contamination and putrefaction. Based on this evidence and thanks to the ability of Attenuated Total Reflectance – Fourier Transform InfraRed (ATR–FTIR) spectroscopy to perform fast analyses on a minimal sample amount, in this study, a new analytical approach to reliably estimate PMI is proposed combining ATR-FTIR analysis of VH human samples with multivariate statistical procedures, such as Principal Component Analysis (PCA) and Partial Least Squares-Discriminant Analysis (PLS-DA), for discriminant classification. Regression procedures, including Partial Least Squares Regression (PLSR), were performed: extremely positive results were obtained, and the most discriminant spectral features were highlighted (peaks at 1665, 1630, 1585, 1400, 1220, 1200, 1120, 854, 835, and 740 cm−1) and associated to PMI classes (average accuracy over 80 %). Specific and reliable markers able to correlate the macromolecular composition of VH with the PMI were identified, revealing a post-mortem protein degradation and amino acids deamination (decrease of proteins and increase of free amino acids and NH3), an increase of lactate, which diffuses from the retina to the VH, and changes in the hyaluronic acid component.

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评估死后间隔期的新方法:对人体玻璃体进行机器学习辅助的无标记 ATR-FTIR 分析。
法医学的一个关键问题是确定死后间隔时间(PMI),即从死亡到发现尸体之间的时间。尽管已经采用了多种方法进行估算,但目前只能获得近似值。玻璃体(VH)是晶状体和视网膜之间的无血管组织,主要由胶原纤维网、透明质酸和透明细胞组成。近来,它因易于采集、微生物污染和腐败程度低而受到法医学的关注。基于这一证据,并得益于衰减全反射-傅立叶变换红外(ATR-FTIR)光谱法能够对极少量的样本进行快速分析,本研究提出了一种新的分析方法,将对 VH 人体样本的 ATR-FTIR 分析与多变量统计程序(如主成分分析(PCA)和偏最小二乘判别分析(PLS-DA))相结合,对 PMI 进行可靠估计,以进行判别分类。进行了回归程序,包括部分最小二乘法回归(PLSR):获得了非常积极的结果,突出了最具区分性的光谱特征(1665、1630、1585、1400、1220、1200、1120、854、835 和 740 cm-1 处的峰值),并与 PMI 类别相关联(平均准确率超过 80%)。鉴定出了能够将 VH 的大分子组成与 PMI 联系起来的特定可靠标记,揭示了死后蛋白质降解和氨基酸脱氨(蛋白质减少,游离氨基酸和 NH3 增加)、从视网膜扩散到 VH 的乳酸增加以及透明质酸成分的变化。
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来源期刊
CiteScore
8.40
自引率
11.40%
发文量
1364
审稿时长
40 days
期刊介绍: Spectrochimica Acta, Part A: Molecular and Biomolecular Spectroscopy (SAA) is an interdisciplinary journal which spans from basic to applied aspects of optical spectroscopy in chemistry, medicine, biology, and materials science. The journal publishes original scientific papers that feature high-quality spectroscopic data and analysis. From the broad range of optical spectroscopies, the emphasis is on electronic, vibrational or rotational spectra of molecules, rather than on spectroscopy based on magnetic moments. Criteria for publication in SAA are novelty, uniqueness, and outstanding quality. Routine applications of spectroscopic techniques and computational methods are not appropriate. Topics of particular interest of Spectrochimica Acta Part A include, but are not limited to: Spectroscopy and dynamics of bioanalytical, biomedical, environmental, and atmospheric sciences, Novel experimental techniques or instrumentation for molecular spectroscopy, Novel theoretical and computational methods, Novel applications in photochemistry and photobiology, Novel interpretational approaches as well as advances in data analysis based on electronic or vibrational spectroscopy.
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