Transcriptome-wide investigation and functional characterization reveal a terpene synthase involved in γ-terpinene biosynthesis in Monarda citriodora

IF 3.9 4区 生物学 Q1 GENETICS & HEREDITY Functional & Integrative Genomics Pub Date : 2024-11-26 DOI:10.1007/s10142-024-01491-z
Mir Abdul Wajid, Priyanka Sharma, Aasim Majeed, Sheetal Bhat, Tsering Angmo, Mohd Fayaz, Koushik Pal, Sonali Andotra, Wajid Waheed Bhat, Prashant Misra
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Abstract

Monarda citriodora Cerv. ex Lag. is a rich source of industrially important compounds like γ-terpinene, carvacrol, thymol and thymoquinone. Understanding the regulation of γ-terpinene biosynthesis, a precursor for other monoterpenes, could facilitate upscaling of these metabolites in M. citriodora. Therefore, the present study aimed to unravel and characterize the terpene synthase (TPS) involved in γ-terpinene biosynthesis. Homology searches revealed 33 TPS members in the transcriptome assembly of M. citriodora. Based on the correlation of expression patterns and phytochemical profile, McTPS22 emerged as the putative TPS for γ-terpinene biosynthesis. Molecular docking suggested geranyl diphosphate (GPP) as a potential substrate for McTPS22. Heterologous expression in Escherichia coli and Nicotiana benthamiana confirmed the role of McTPS22 in γ-terpinene biosynthesis. Both in-silico prediction and confocal microscopy indicated plastidial localization of the McTPS22. Gene co-expression network analysis revealed 507 genes interacting with McTPS22, including 80 transcription factors (TFs). Of these, 46 TFs had binding sites in the McTPS22 promoter, and 36 showed significant correlations with γ-terpinene accumulation, suggesting they may be potential regulators. Promoter analysis indicated regulation by phytohormones and abiotic factors, confirmed by phytohormone elicitation and QRT-PCR. The histochemical GUS staining suggested that McTPS22 is primarily active in the glandular trichomes of M. citriodora. The present work provides insights into the molecular regulation of biosynthesis of γ-terpinene in M. citriodora.

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全转录组调查和功能表征揭示了一种参与柠檬树γ-萜烯生物合成的萜烯合成酶
Monarda citriodora Cerv. ex Lag. 是γ-萜品烯、香芹酚、百里酚和胸腺醌等重要工业化合物的丰富来源。γ-萜品烯是其他单萜的前体,了解γ-萜品烯生物合成的调控可促进柠檬香豆属植物中这些代谢物的升级。因此,本研究旨在揭示参与γ-萜烯生物合成的萜烯合成酶(TPS)及其特征。通过同源检索,在柠檬杉的转录组中发现了 33 个 TPS 成员。根据表达模式和植物化学特征的相关性,McTPS22 成为γ-松油烯生物合成的推定 TPS。分子对接表明,二磷酸香叶酯(GPP)是 McTPS22 的潜在底物。在大肠杆菌和烟草中的异源表达证实了 McTPS22 在γ-松油烯生物合成中的作用。通过室内预测和共聚焦显微镜观察发现,McTPS22定位于质体。基因共表达网络分析显示有 507 个基因与 McTPS22 相互作用,包括 80 个转录因子(TFs)。其中,46 个转录因子在 McTPS22 启动子中有结合位点,36 个转录因子与 γ-松油醇的积累有显著相关性,表明它们可能是潜在的调控因子。启动子分析表明受到植物激素和非生物因素的调控,植物激素诱导和 QRT-PCR 也证实了这一点。组织化学 GUS 染色表明,McTPS22 主要活跃在柠檬香豆属植物的腺毛中。本研究揭示了柑橘属植物γ-萜品烯生物合成的分子调控过程。
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来源期刊
CiteScore
3.50
自引率
3.40%
发文量
92
审稿时长
2 months
期刊介绍: Functional & Integrative Genomics is devoted to large-scale studies of genomes and their functions, including systems analyses of biological processes. The journal will provide the research community an integrated platform where researchers can share, review and discuss their findings on important biological questions that will ultimately enable us to answer the fundamental question: How do genomes work?
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