Estimation of multicomponent reactions’ yields from networks of mechanistic steps

IF 14.7 1区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Nature Communications Pub Date : 2024-11-27 DOI:10.1038/s41467-024-54550-1
Sara Szymkuć, Agnieszka Wołos, Rafał Roszak, Bartosz A. Grzybowski
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Abstract

This work describes estimation of yields of complex, multicomponent reactions (MCRs) based on the modeled networks of mechanistic steps spanning both the main reaction pathway as well as immediate and downstream side reactions. Because experimental values of the kinetic rate constants for individual mechanistic transforms are extremely sparse, these constants are approximated here using Mayr’s nucleophilicity and electrophilicity parameters fine-tuned by correction terms grounded in linear free-energy relationships. With this formalism, the model trained on the mechanistic networks of only 20 – but mechanistically- and yield-diverse MCRs – transfers well to newly discovered MCRs that are based on markedly different mechanisms and types of individual mechanistic transforms. These results suggest that mechanistic-level approach to yield estimation may be a useful alternative to models that are derived from full-reaction data and lack information about yield-lowering side reactions.

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从机理步骤网络估算多组分反应的产率
这项工作描述了基于跨越主反应途径以及直接和下游副反应的机理步骤模型网络对复杂多组分反应(MCR)产率的估算。由于单个机理转换的动力学速率常数的实验值非常稀少,因此在此使用基于线性自由能关系的校正项对亲核性和亲电性参数进行微调,从而近似得到这些常数。利用这种形式主义,在仅有的 20 个但在机理和产量上各不相同的 MCR 的机理网络上训练出来的模型可以很好地转移到新发现的 MCR 上,这些 MCR 基于明显不同的机理和单个机理转换类型。这些结果表明,机理层面的产率估算方法可能是一种有用的替代方法,可用于替代从全反应数据中得出的、缺乏降低产率副反应信息的模型。
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来源期刊
Nature Communications
Nature Communications Biological Science Disciplines-
CiteScore
24.90
自引率
2.40%
发文量
6928
审稿时长
3.7 months
期刊介绍: Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.
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