Mechanistic basis for the emergence of EPS1 as a catalyst in salicylic acid biosynthesis of Brassicaceae

IF 14.7 1区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Nature Communications Pub Date : 2024-11-28 DOI:10.1038/s41467-024-54437-1
Michael P. Torrens-Spence, Jason O. Matos, Tianjie Li, David W. Kastner, Colin Y. Kim, Ziqi Wang, Christopher M. Glinkerman, Jennifer Sherk, Heather J. Kulik, Yi Wang, Jing-Ke Weng
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Abstract

Salicylic acid (SA) production in Brassicaceae plants is uniquely accelerated from isochorismate by EPS1, a newly identified enzyme in the BAHD acyltransferase family. We present crystal structures of EPS1 from Arabidopsis thaliana in both its apo and substrate-analog-bound forms. Integrating microsecond-scale molecular dynamics simulations with quantum mechanical cluster modeling, we propose a pericyclic rearrangement lyase mechanism for EPS1. We further reconstitute the isochorismate-derived SA biosynthesis pathway in Saccharomyces cerevisiae, establishing an in vivo platform to examine the impact of active-site residues on EPS1 functionality. Moreover, stable transgenic expression of EPS1 in soybean increases basal SA levels, highlighting the enzyme’s potential to enhance defense mechanisms in non-Brassicaceae plants lacking an EPS1 ortholog. Our findings illustrate the evolutionary adaptation of an ancestral enzyme’s active site to enable a novel catalytic mechanism that boosts SA production in Brassicaceae plants.

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芸苔属植物水杨酸生物合成催化剂 EPS1 出现的机理基础
水杨酸(SA)在十字花科(Brassicaceae)植物中的产生是通过 EPS1(一种新发现的 BAHD酰基转移酶家族中的酶类)从异橙皮苷酸中独特地加速产生的。我们展示了拟南芥中 EPS1 的同源物和底物类似物结合形式的晶体结构。结合微秒级分子动力学模拟和量子力学簇建模,我们提出了 EPS1 的周环重排裂解酶机制。我们进一步在酿酒酵母中重建了异构体衍生的 SA 生物合成途径,建立了一个体内平台来研究活性位点残基对 EPS1 功能的影响。此外,EPS1 在大豆中的稳定转基因表达提高了基础 SA 水平,突出了该酶在缺乏 EPS1 同源物的非蔷薇科植物中增强防御机制的潜力。我们的研究结果表明,祖先酶的活性位点在进化过程中发生了适应性变化,从而产生了一种新的催化机制,提高了十字花科植物的 SA 产量。
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来源期刊
Nature Communications
Nature Communications Biological Science Disciplines-
CiteScore
24.90
自引率
2.40%
发文量
6928
审稿时长
3.7 months
期刊介绍: Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.
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