Exploring sex-specific genetic architecture of coronary artery disease in Tehran: a cardiometabolic genetic study.

IF 3.9 3区 医学 Q1 PATHOLOGY Expert Review of Molecular Diagnostics Pub Date : 2024-12-05 DOI:10.1080/14737159.2024.2436399
Leila Najd-Hassan-Bonab, Maryam S Daneshpour, Mojtaba Jafarinia, Mahdi Akbarzadeh, Maryam Moazzam-Jazi, Sara Asgarian, Davood Khalili
{"title":"Exploring sex-specific genetic architecture of coronary artery disease in Tehran: a cardiometabolic genetic study.","authors":"Leila Najd-Hassan-Bonab, Maryam S Daneshpour, Mojtaba Jafarinia, Mahdi Akbarzadeh, Maryam Moazzam-Jazi, Sara Asgarian, Davood Khalili","doi":"10.1080/14737159.2024.2436399","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>The development of coronary artery disease (CAD) is influenced by sex and genetic factors. Genome-wide association studies (GWAS) have linked genetic loci to CAD, mostly in European populations. The study aims to find sex-related genetic differences in the Iranian population.</p><p><strong>Research design and methods: </strong>We conducted a sex-stratified GWAS with 4519 subjects (1832 males and 2687 females) in the discovery group and 922 subjects (495 males and 427 females) in the confirmation group of an Iranian cohort. We analyzed 9,141,124 variants using a genome-wide complex trait analysis (GCTA) tool.</p><p><strong>Results: </strong>We detected distinct genetic variants associated with CAD in males: rs34952209 [OR = 1.79; <i>p</i> = 5.216E-8], rs1432687863 [OR = 1.95; <i>p</i> = 8.477E-8], and in females, rs7314741 [OR = 1.67; <i>p</i> = 7.142-8E] positively influenced CAD risk. The CAD-associated SNPs that were obtained have been confirmed using independent samples. Rs3495229 May impact histone mark and Pou2f2 motifs, while rs7314741 in the LEM Domain Containing 3 (LEMD3) promoter may affect a regulatory motif for the STAT transcription factor. According to Roadmap and ENCODE data, Rs1432687863 is a new variant affecting CAD in males, potentially through H3K9me3 in the heart.</p><p><strong>Conclusions: </strong>Our findings highlight the role of sex-specific genetic differences in CAD development, providing novel insights into disease pathways which is not appropriate using a sex-combined strategy. [Figure: see text].</p>","PeriodicalId":12113,"journal":{"name":"Expert Review of Molecular Diagnostics","volume":" ","pages":"1-10"},"PeriodicalIF":3.9000,"publicationDate":"2024-12-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Expert Review of Molecular Diagnostics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/14737159.2024.2436399","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PATHOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Background: The development of coronary artery disease (CAD) is influenced by sex and genetic factors. Genome-wide association studies (GWAS) have linked genetic loci to CAD, mostly in European populations. The study aims to find sex-related genetic differences in the Iranian population.

Research design and methods: We conducted a sex-stratified GWAS with 4519 subjects (1832 males and 2687 females) in the discovery group and 922 subjects (495 males and 427 females) in the confirmation group of an Iranian cohort. We analyzed 9,141,124 variants using a genome-wide complex trait analysis (GCTA) tool.

Results: We detected distinct genetic variants associated with CAD in males: rs34952209 [OR = 1.79; p = 5.216E-8], rs1432687863 [OR = 1.95; p = 8.477E-8], and in females, rs7314741 [OR = 1.67; p = 7.142-8E] positively influenced CAD risk. The CAD-associated SNPs that were obtained have been confirmed using independent samples. Rs3495229 May impact histone mark and Pou2f2 motifs, while rs7314741 in the LEM Domain Containing 3 (LEMD3) promoter may affect a regulatory motif for the STAT transcription factor. According to Roadmap and ENCODE data, Rs1432687863 is a new variant affecting CAD in males, potentially through H3K9me3 in the heart.

Conclusions: Our findings highlight the role of sex-specific genetic differences in CAD development, providing novel insights into disease pathways which is not appropriate using a sex-combined strategy. [Figure: see text].

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
在德黑兰探索冠状动脉疾病的性别特异性遗传结构:一项心脏代谢遗传研究。
背景:冠状动脉疾病(CAD)的发展受性别和遗传因素的影响。全基因组关联研究(GWAS)已经将遗传位点与CAD联系起来,主要是在欧洲人群中。这项研究旨在发现伊朗人群中与性别相关的基因差异。研究设计和方法:我们进行了性别分层的GWAS,发现组有4519名受试者(1832名男性和2687名女性),确认组有922名受试者(495名男性和427名女性)。我们使用全基因组复杂性状分析(GCTA)工具分析了9,141,124个变异。结果:我们在男性中检测到与CAD相关的不同遗传变异:rs34952209 [OR = 1.79;p = 5.216E-8], rs1432687863 [OR = 1.95;p = 8.4777 e -8],女性为rs7314741 [OR = 1.67;p = 7.142-8E]与冠心病风险呈正相关。所获得的cad相关snp已通过独立样本得到证实。Rs3495229可能影响组蛋白标记和Pou2f2基序,而LEM Domain Containing 3 (LEMD3)启动子中的rs7314741可能影响STAT转录因子的调控基序。根据Roadmap和ENCODE数据,Rs1432687863是一种影响男性CAD的新变异,可能通过心脏中的H3K9me3。结论:我们的研究结果强调了性别特异性遗传差异在CAD发展中的作用,为不适合使用性别组合策略的疾病途径提供了新的见解。[图:见正文]。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
6.60
自引率
0.00%
发文量
71
审稿时长
1 months
期刊介绍: Expert Review of Molecular Diagnostics (ISSN 1473-7159) publishes expert reviews of the latest advancements in the field of molecular diagnostics including the detection and monitoring of the molecular causes of disease that are being translated into groundbreaking diagnostic and prognostic technologies to be used in the clinical diagnostic setting. Each issue of Expert Review of Molecular Diagnostics contains leading reviews on current and emerging topics relating to molecular diagnostics, subject to a rigorous peer review process; editorials discussing contentious issues in the field; diagnostic profiles featuring independent, expert evaluations of diagnostic tests; meeting reports of recent molecular diagnostics conferences and key paper evaluations featuring assessments of significant, recently published articles from specialists in molecular diagnostic therapy. Expert Review of Molecular Diagnostics provides the forum for reporting the critical advances being made in this ever-expanding field, as well as the major challenges ahead in their clinical implementation. The journal delivers this information in concise, at-a-glance article formats: invaluable to a time-constrained community.
期刊最新文献
Exploring the prognostic and predictive potential of bacterial biomarkers in non-gastrointestinal solid tumors. Unraveling the future: hot topics shaping molecular diagnostics today. Dual-energy spectral CT in renal cell carcinoma: dawn of a brand-new era? Peripheral blood biomarkers in monitoring treatment response in breast cancer patients. Decoding pancreatic cancer: key risk factors across genetics and lifestyle.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1