Exploring microRNA signatures in pediatric non-infectious uveitis: meta-analysis and molecular profiling of patient samples.

IF 2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Journal of Applied Genetics Pub Date : 2024-12-19 DOI:10.1007/s13353-024-00922-8
Olga Wawrzyniak, Dariusz Wawrzyniak, Michał Smuszkiewicz, Paweł Głodowicz, Anna Gotz-Więckowska, Katarzyna Rolle
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Abstract

To find a distinct non-coding RNA characteristic for idiopathic uveitis in the pediatric population. To explore the autoimmune-related miRNA expression profile in pediatric patients with idiopathic uveitis (IU) and juvenile idiopathic arthritis-associated uveitis (JIA-AU) and find a common molecular background for idiopathic uveitis and other autoimmune diseases. The expression levels of miRNAs were analyzed by quantitative real-time PCR using serum samples from patients with idiopathic uveitis (n = 8), juvenile idiopathic arthritis-associated uveitis (n = 7), and healthy controls. We selected the most promising miRNAs from the original research papers: miR-16-5p, miR-26a-5p, miR-145-5p, and miR-451a as markers for juvenile idiopathic arthritis; miR-23a-3p, miR-29a-3p, miR-140-5p, miR-193a-5p, and miR-491-5p for uveitis in the adult population; and miR-125a-5p, miR-146a-5p, miR-155-5p, miR-223-5p, and miR-223-3p characteristic for both diseases and confirm their expression changes in serum from children with idiopathic uveitis. We comprehensively reviewed the literature enrolling the papers that met the inclusion criteria (miRNA and non-infectious uveitis/juvenile idiopathic arthritis) and performed target prediction analysis of appoint miRNAs. It additionally confirmed that altered miRNAs target the immunologically involved genes. Immunological-involved miRNAs such as miR-146a-5p and miR-155-5p show diverse expression levels in different patients as they interact with multiple targets. miR-204-5p is downregulated in both patient groups compared to healthy controls. miR-204-5p and miR-155-5p are candidates for molecular markers of autoimmune uveitis. We did not identify the miRNAs specific only to idiopathic uveitis, but for the first time in the pediatric population, we confirmed that this disease entity shares a molecular basis with other autoimmune diseases. Further studies are required to elucidate the molecular interactions among miRNAs, cytokines, and transcription factors within the intricate immune response, particularly in the eye.

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探索儿童非感染性葡萄膜炎的microRNA特征:患者样本的荟萃分析和分子谱。
在儿科人群中寻找特发性葡萄膜炎的独特非编码RNA特征。探讨儿童特发性葡萄膜炎(IU)和青少年特发性关节炎相关性葡萄膜炎(JIA-AU)患者自身免疫相关miRNA表达谱,寻找特发性葡萄膜炎和其他自身免疫性疾病的共同分子背景。使用特发性葡萄膜炎患者(n = 8)、青少年特发性关节炎相关性葡萄膜炎患者(n = 7)和健康对照者的血清样本,通过实时荧光定量PCR分析miRNAs的表达水平。我们从原始研究论文中选择了最有希望的mirna: miR-16-5p、miR-26a-5p、miR-145-5p和miR-451a作为青少年特发性关节炎的标志物;miR-23a-3p、miR-29a-3p、miR-140-5p、miR-193a-5p和miR-491-5p对成人葡萄膜炎的影响;以及miR-125a-5p、miR-146a-5p、miR-155-5p、miR-223-5p和miR-223-3p在两种疾病中的特征,并证实了它们在特发性葡萄膜炎患儿血清中的表达变化。我们综合查阅了符合纳入标准(miRNA和非感染性葡萄膜炎/青少年特发性关节炎)的文献,并对指定miRNA进行了靶标预测分析。它还证实了改变的miRNAs靶向免疫相关基因。免疫相关的mirna如miR-146a-5p和miR-155-5p在不同的患者中表现出不同的表达水平,因为它们与多个靶标相互作用。与健康对照组相比,miR-204-5p在两组患者中均下调。miR-204-5p和miR-155-5p是自身免疫性葡萄膜炎的候选分子标志物。我们没有发现特发性葡萄膜炎特异性的mirna,但首次在儿科人群中,我们证实了这种疾病实体与其他自身免疫性疾病具有相同的分子基础。需要进一步的研究来阐明mirna、细胞因子和转录因子在复杂的免疫反应中的分子相互作用,特别是在眼睛中。
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来源期刊
Journal of Applied Genetics
Journal of Applied Genetics 生物-生物工程与应用微生物
CiteScore
4.30
自引率
4.20%
发文量
62
审稿时长
6-12 weeks
期刊介绍: The Journal of Applied Genetics is an international journal on genetics and genomics. It publishes peer-reviewed original papers, short communications (including case reports) and review articles focused on the research of applicative aspects of plant, human, animal and microbial genetics and genomics.
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