The structure of His15 acetamide-modified hen egg-white lysozyme: a nice surprise from an old friend.

IF 1.1 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Acta crystallographica. Section F, Structural biology communications Pub Date : 2025-02-01 Epub Date: 2025-01-13 DOI:10.1107/S2053230X2500010X
Jose Malanho da Silva, Jose Lanuza, Francesco Bruno, Vito Calderone, Enrico Ravera
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Abstract

Hen egg-white lysozyme (HEWL) is a small polycationic protein which is highly soluble and stable. This has led to it becoming a `molecular laboratory' where chemical biological operations and structural techniques are tested. To date, HEWL accounts for 1233 PDB entries, roughly 0.5% of the total, making it the best-represented protein in the PDB. With the aim of unambiguously identifying the N atom of the His15 side chain that is most reactive towards iodoacetamide, the structure of chemically modified HEWL was determined by crystallizing it using the `15 minutes lysozyme' protocol. This protocol invariably yields tetragonal crystals of the unmodified protein. To our surprise, we found that the crystals of the modified protein had similar unit-cell parameters but that refinement was only possible when considering an orthorhombic system.

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His15乙酰酰胺修饰的蛋清溶菌酶的结构:一个来自老朋友的惊喜。
蛋清溶菌酶(HEWL)是一种高可溶性、稳定性好的小聚阳离子蛋白。这使得它成为一个“分子实验室”,在那里测试化学生物操作和结构技术。迄今为止,hhewl在PDB中占1233个条目,约占总数的0.5%,使其成为PDB中最具代表性的蛋白质。为了明确识别对碘乙酰胺反应性最强的His15侧链的N原子,使用“15分钟溶菌酶”方案对化学修饰的HEWL进行结晶,确定其结构。这种方法总是产生未经修饰的蛋白质的四方晶体。令我们惊讶的是,我们发现修饰蛋白的晶体具有相似的单位细胞参数,但只有在考虑正交体系时才有可能进行改进。
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来源期刊
Acta crystallographica. Section F, Structural biology communications
Acta crystallographica. Section F, Structural biology communications BIOCHEMICAL RESEARCH METHODSBIOCHEMISTRY &-BIOCHEMISTRY & MOLECULAR BIOLOGY
CiteScore
1.90
自引率
0.00%
发文量
95
期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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