The pan-cancer analysis of LRG1 and its potential role in kidney renal clear cell carcinoma†

IF 3.6 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY RSC medicinal chemistry Pub Date : 2025-02-11 DOI:10.1039/D4MD00940A
Ziwen Lei, Shiyu Song, Yizhuo Geng, Bian Liu, Yongzheng Li, Huan Min, Saiyang Zhang and Yingqiu Qi
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Abstract

Leucine-rich α-2 glycoprotein 1 (LRG1) is a secreted glycoprotein implicated in various diseases, yet its role across multiple cancers remains insufficiently explored. Consequently, we conducted a comprehensive bioinformatics analysis, exploring LRG1 expression patterns, prognostic implications, and potential therapeutic associations in a pan-cancer context. Additionally, we collected gene expression and clinical data from patients with kidney renal clear cell carcinoma (KIRC) from TCGA, conducting gene set enrichment analysis (GSEA) and Cox proportional hazards regression analysis to explore the potential regulatory role of LRG1 in KIRC. Our study revealed that LRG1 expression is upregulated in 18 cancer types, with elevated levels correlating with poor prognostic outcomes in several cancers, notably KIRC. Epigenetic analysis showed hypomethylation in the LRG1 promoter region, potentially contributing to the overexpression of LRG1. Moreover, LRG1 expression was linked to immunotherapeutic responses and altered drug sensitivities, particularly influencing the efficacy of tyrosine kinase inhibitors. In KIRC, high LRG1 expression was associated with the activation of key pathways, including angiogenesis, epithelial–mesenchymal transition (EMT), and hypoxia signalling. We identified key gene pairs interacting with LRG1 in KIRC, including CARD14 and CYP8B1, with CARD14 overexpression correlating with poorer clinical outcomes and CYP8B1 indicating a favourable prognosis. In conclusion, LRG1 emerges as a potential biomarker for prognosis and immunotherapy responsiveness in both pan-cancer and KIRC contexts. This study provides a theoretical foundation for further research on the therapeutic potential of target regulating LRG1 in cancer treatment.

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LRG1在肾透明细胞癌中的泛癌分析及其潜在作用。
富亮氨酸α-2糖蛋白1 (LRG1)是一种与多种疾病有关的分泌糖蛋白,但其在多种癌症中的作用仍未得到充分探讨。因此,我们进行了全面的生物信息学分析,探索LRG1表达模式、预后意义以及在泛癌症背景下的潜在治疗关联。此外,我们收集TCGA肾透明细胞癌(KIRC)患者的基因表达和临床数据,进行基因集富集分析(GSEA)和Cox比例风险回归分析,探讨LRG1在KIRC中的潜在调节作用。我们的研究表明,LRG1在18种癌症类型中表达上调,在一些癌症中,尤其是KIRC中,表达水平升高与预后不良相关。表观遗传学分析显示,LRG1启动子区域的低甲基化可能导致LRG1过表达。此外,LRG1表达与免疫治疗反应和药物敏感性改变有关,特别是影响酪氨酸激酶抑制剂的疗效。在KIRC中,LRG1的高表达与关键通路的激活有关,包括血管生成、上皮-间质转化(EMT)和缺氧信号。我们确定了KIRC中与LRG1相互作用的关键基因对,包括CARD14和CYP8B1, CARD14过表达与较差的临床结果相关,而CYP8B1预示着良好的预后。综上所述,LRG1在泛癌症和KIRC背景下都是一种潜在的预后和免疫治疗反应性的生物标志物。本研究为进一步研究调控LRG1的靶点在肿瘤治疗中的治疗潜力提供了理论基础。
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来源期刊
CiteScore
5.80
自引率
2.40%
发文量
129
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