Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life

F. Rimet, E. Aylagas, Á. Borja, A. Bouchez, Alexis Canino, C. Chauvin, T. Chonova, Fedor Čiampor Jr, F. Costa, B. Ferrari, R. Gastineau, C. Goulon, M. Gugger, M. Holzmann, R. Jahn, M. Kahlert, Wolf-Henning Kusber, C. Laplace-Treyture, F. Leese, F. Leliaert, D. Mann, F. Marchand, V. Méléder, J. Pawłowski, S. Rasconi, S. Rivera, R. Rougerie, M. Schweizer, R. Trobajo, V. Vasselon, R. Vivien, A. Weigand, A. Witkowski, J. Zimmermann, T. Ekrem
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引用次数: 26

Abstract

DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode reference libraries, it is important to develop and follow best practices to ensure optimal quality and traceability of the metadata associated with the reference barcodes used for identification. Sufficient metadata, as well as vouchers, corresponding to each reference barcode must be available to ensure reliable barcode library curation and, thereby, provide trustworthy baselines for downstream molecular species identification. This document (1) specifies the data and metadata required to ensure the relevance, the accessibility and traceability of DNA barcodes and (2) specifies the recommendations for DNA harvesting and for the storage of both voucher specimens/samples and barcode data.
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元数据标准和实用指南标本和DNA策展时,建立条形码参考图书馆的水生生物
DNA条形码和元条形码越来越多地用于有效和精确地评估和监测水生生态系统的生物多样性。由于这些方法依赖于条形码参考库的数据可用性和质量,因此开发和遵循最佳实践以确保与用于识别的参考条形码相关的元数据的最佳质量和可追溯性非常重要。必须有与每个参考条形码对应的足够的元数据和凭证,以确保可靠的条形码库管理,从而为下游分子物种鉴定提供可靠的基线。本文件(1)规定了确保DNA条形码的相关性、可及性和可追溯性所需的数据和元数据;(2)规定了DNA采集和凭证标本/样品和条形码数据存储的建议。
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来源期刊
Metabarcoding and Metagenomics
Metabarcoding and Metagenomics Agricultural and Biological Sciences-Animal Science and Zoology
CiteScore
5.40
自引率
0.00%
发文量
25
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