{"title":"MICROSATELLITE FINGERPRINTING OF SOME VITIS VINIFERA L CULTIVARS GROWN IN ROMANIA","authors":"R. Gheorghe, C. Popescu, D. Pamfil","doi":"10.15835/BUASVMCN-HORT:629","DOIUrl":null,"url":null,"abstract":"The intensive renewal of grapevine plantations, imp lementation of EU regulations and reshaping of national viticulture and wine industri es that take place at present in Romania require application of efficient methods for the ac curate cultivars identification. The aim of this study is to identify and discriminate eleven n ative Romanian grapevine varieties with the goal to obtain a genotype-specific profile by using microsatellites, the undisputed markers of choice for grape identification and parentage analy sis (Sefc et al. 2001). All the primers paires yielded clear and scorable a mplified products and proved to be multi-allelic. The total number of different allele s per locus ranged from 4 (in VVMD24 and VVIQ52) to 10 (in VMC8G9, UDV125and VMC5G6.1) with a total of 87 alleles considering all loci and a mean value of 7.9 alleles per locus. The microsatellite profile of the investigated cultivars showed a high level of genetic diversity among their flanking regions and all cultivars were found to have an unique allelic prof ile. The number of alleles detected with Romanian grapevine genotipes was very similar to those obtained with SSR microsatellites on European cultivars (Sefc et al., 2000). The expe cted heterozygosity (gene diversity) values were high for all DNA samples ranging from 0.60 at locus VVMD24 to 0.88 at locus VVMD28. The observed heterozygosity varied between 0.63 at locus VVMD24 to 1 at locus VVMD28 and was higher than the expected one at 6 out of 11 loci. All data obtained in this study provide valuable ge netic information, especially in the absence of comprehensive studies on the Romanian grape cultivars. SSR markers proved to be powerful tool and very efficient for cultivar id entification and analysis of their genetic structure. Genetic characterization of a larger num ber of authochtonous cultivars is the first step before to start further investigation to verif y the homonymous and synonymous among Romanian cultivars and to reveal the genetic relati onship between national and European grapevine germplasm.","PeriodicalId":9406,"journal":{"name":"Bulletin of University of Agricultural Sciences and Veterinary Medicine Cluj-Napoca: Horticulture","volume":"65 1","pages":"674"},"PeriodicalIF":0.0000,"publicationDate":"2008-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"4","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bulletin of University of Agricultural Sciences and Veterinary Medicine Cluj-Napoca: Horticulture","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.15835/BUASVMCN-HORT:629","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4
Abstract
The intensive renewal of grapevine plantations, imp lementation of EU regulations and reshaping of national viticulture and wine industri es that take place at present in Romania require application of efficient methods for the ac curate cultivars identification. The aim of this study is to identify and discriminate eleven n ative Romanian grapevine varieties with the goal to obtain a genotype-specific profile by using microsatellites, the undisputed markers of choice for grape identification and parentage analy sis (Sefc et al. 2001). All the primers paires yielded clear and scorable a mplified products and proved to be multi-allelic. The total number of different allele s per locus ranged from 4 (in VVMD24 and VVIQ52) to 10 (in VMC8G9, UDV125and VMC5G6.1) with a total of 87 alleles considering all loci and a mean value of 7.9 alleles per locus. The microsatellite profile of the investigated cultivars showed a high level of genetic diversity among their flanking regions and all cultivars were found to have an unique allelic prof ile. The number of alleles detected with Romanian grapevine genotipes was very similar to those obtained with SSR microsatellites on European cultivars (Sefc et al., 2000). The expe cted heterozygosity (gene diversity) values were high for all DNA samples ranging from 0.60 at locus VVMD24 to 0.88 at locus VVMD28. The observed heterozygosity varied between 0.63 at locus VVMD24 to 1 at locus VVMD28 and was higher than the expected one at 6 out of 11 loci. All data obtained in this study provide valuable ge netic information, especially in the absence of comprehensive studies on the Romanian grape cultivars. SSR markers proved to be powerful tool and very efficient for cultivar id entification and analysis of their genetic structure. Genetic characterization of a larger num ber of authochtonous cultivars is the first step before to start further investigation to verif y the homonymous and synonymous among Romanian cultivars and to reveal the genetic relati onship between national and European grapevine germplasm.
目前,罗马尼亚正在进行葡萄种植园的密集更新、欧盟法规的实施以及国家葡萄栽培和葡萄酒产业的重塑,这些都需要采用有效的方法来进行葡萄品种的准确鉴定。本研究的目的是鉴定和区分11个罗马尼亚本地葡萄品种,目的是通过使用微卫星(葡萄鉴定和亲本分析中无可争议的选择标记)获得基因型特异性谱(Sefc et al. 2001)。所有引物都得到了清晰、可评分的简化产物,证明是多等位的。每个位点的等位基因总数从4个(VVMD24和VVIQ52)到10个(VMC8G9、udv125和VMC5G6.1)不等,考虑所有位点总共有87个等位基因,平均每个位点有7.9个等位基因。研究品种的微卫星图谱显示其侧翼区域具有较高的遗传多样性,所有品种都具有独特的等位基因图谱。罗马尼亚葡萄基因型检测到的等位基因数量与用SSR微卫星在欧洲葡萄品种上获得的等位基因数量非常相似(Sefc et al., 2000)。所有DNA样本的期望杂合度(基因多样性)值都很高,从位点VVMD24的0.60到位点VVMD28的0.88不等。观察到的杂合度在VVMD24位点的0.63到VVMD28位点的1之间变化,11个位点中有6个位点的杂合度高于预期。本研究获得的所有数据都提供了有价值的遗传信息,特别是在缺乏对罗马尼亚葡萄品种的全面研究的情况下。SSR标记是品种鉴定和遗传结构分析的有效工具。对大量的葡萄品种进行遗传鉴定是进一步研究罗马尼亚葡萄品种之间的同义和同义关系以及揭示罗马尼亚葡萄种质资源与欧洲葡萄种质资源遗传关系的第一步。