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Introductory Chapter: Scientific Research on Mycobacteria and the Absence of Evaluation Processes 导论:分枝杆菌的科学研究和评价方法的缺失
Pub Date : 2018-06-20 DOI: 10.5772/intechopen.76831
Wellman Ribón
About 150 species belong to the Mycobacterium genus and are known as acid-fast bacillus. These bacteria are widely distributed in different ecosystems and it can be isolated from water, soil, or air. The Mycobacterium genus has a great metabolic diversity that has allowed them to adapt and survive in almost all environmental conditions. They are called slow-growing bacteria, because of their long generation times in comparison with other bacterial genus. Currently, there are new species which are being studied in order to be classified as new members of the Mycobacterium genus.
大约有150种属于分枝杆菌属,被称为抗酸杆菌。这些细菌广泛分布在不同的生态系统中,可以从水、土壤或空气中分离出来。分枝杆菌属具有巨大的代谢多样性,这使它们能够在几乎所有的环境条件下适应和生存。它们被称为生长缓慢的细菌,因为与其他细菌属相比,它们的繁殖时间更长。目前,有一些新的物种正在被研究,以便被归类为分枝杆菌属的新成员。
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引用次数: 0
Overview of Non Tuberculosis Mycobacterial Lung Diseases 非结核分枝杆菌肺病综述
Pub Date : 2018-06-20 DOI: 10.5772/intechopen.73542
Overview o.N.T.M.L. Diseases
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引用次数: 0
Conventional and Molecular Diagnosis of Drug-Sensitive and Drug-Resistant Pulmonary Tuberculosis 药敏和耐药肺结核的常规和分子诊断
Pub Date : 2018-06-20 DOI: 10.5772/INTECHOPEN.75004
Y. Martínez-Martínez, Herminia GuadalupeMartínez-Rodríguez, S. Said-Fernández
Tuberculosis is a transmissible disease, which is primarily caused by the bacteria Mycobacterium tuberculosis and by other Mycobacterium species, forming the Mycobacterium tuberculosis complex. Until the end of the 20th Century, most cases of pulmonary tuberculosis were considered curable. Nevertheless, the rising of tuberculosis resistant to firstand second-line anti-tuberculous drugs is threatening the world’s tuberculosis control programs. Due to this fact, the World Health Organization and other public health institutions recommended applying the conventional methods, affordable by low-incoming countries, to diagnose tuberculosis and to develop faster and more sensitive and specific methods to identifyM. tuberculosis and determine their condition of anti-tuberculous drug resistance or drug sensitivity. In this chapter, we mention the most used conventional and molecular methods designed to identify M. tuberculosis and to determine their drug sensitivity or drug resistance. We also briefly describe the fundamentals of methods and its advantages and limitations.
结核病是一种传染性疾病,主要由结核分枝杆菌和其他分枝杆菌种类引起,形成结核分枝杆菌复合体。直到20世纪末,大多数肺结核病例都被认为是可以治愈的。然而,对一线和二线抗结核药物产生耐药性的结核病的增加正威胁着世界结核病控制规划。由于这一事实,世界卫生组织和其他公共卫生机构建议采用低收入国家负担得起的常规方法来诊断结核病,并制定更快、更敏感和更具体的方法来确定结核病。并确定其抗结核药物耐药或药物敏感情况。在本章中,我们提到了最常用的常规方法和分子方法,旨在鉴定结核分枝杆菌并确定其药物敏感性或耐药性。我们还简要介绍了方法的基本原理及其优点和局限性。
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引用次数: 1
Mycobacterium as Polycyclic Aromatic Hydrocarbons (PAHs) Degrader 分枝杆菌作为多环芳烃(PAHs)的降解剂
Pub Date : 2018-06-20 DOI: 10.5772/INTECHOPEN.73546
Dushyant Dudhagara, B. Dave
The genus Mycobacterium has the ability to degrade various environmental pollutants including polycyclic aromatic hydrocarbons (PAHs). Mycobacterium has an ability to withstand adverse environmental conditions and it has been considered for future bio- remediation applications for the removal of PAH contaminants from crude oil–polluted sites. The degradation of PAHs using a cost-effective laboratory microcosm system was discussed. The various conditions such as environmental habitat, degradation behavior, enzymatic mechanisms, and ecological survival are thoroughly discussed in this chapter. Based on the above study, Mycobacterium has proved to be a better candidate in bioreme diation of PAH-contaminated sites.
分枝杆菌属具有降解各种环境污染物的能力,包括多环芳烃(PAHs)。分枝杆菌有能力承受恶劣的环境条件,它已被考虑用于未来的生物修复应用,以去除原油污染场地的多环芳烃污染物。讨论了成本效益高的实验室微观系统对多环芳烃的降解。在本章中深入讨论了各种条件,如环境栖息地,降解行为,酶机制和生态生存。基于以上研究,分枝杆菌在多环芳烃污染位点的生物群落辐射中具有较好的候选作用。
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引用次数: 11
Mycobacterium tuberculosis: Macrophage Takeover and Modulation of Innate Effector Responses 结核分枝杆菌:巨噬细胞接管和先天效应反应的调节
Pub Date : 2018-06-20 DOI: 10.5772/INTECHOPEN.75003
K. H. Bhat, Imtiyaz Yaseen
Macrophages mediate the first line of defense in the host against various intracellular path- ogens. They are armed with several immune-effector mechanisms to detect and combat pathogens. However, intracellular pathogens have developed strategies to overcome the macrophage protective immune responses and colonize inside the macrophages. Tuberculosis (TB), both pulmonary and extrapulmonary, is an infectious disease of global concern caused by Mycobacterium tuberculosis . M . tuberculosis is a highly successful pathogen and has acquired various strategies to downregulate critical innate-effector immune responses of macrophages such as phagosome-lysosome fusion, antigen presentation, autophagy, and inhibition of reactive oxygen (ROI) and reactive nitrogen (RNI) species to ensure its longer survival inside the macrophages. In addition to these, the bacilli also modulate Tcell immune response which can help the bacilli to survive inside the host for a long time. In this chapter, we focus to describe important macrophage innate defense mechanisms and the signaling that can influence Tcell adaptive response and the strategies adopted by the bacilli to exploit these signaling cascades to favor its replication and persistence inside the macrophages for establishing a productive infection. by macrophage surveillance their safe which in designing suitable interventions against
巨噬细胞介导宿主抵抗各种细胞内通路因子的第一道防线。它们配备了几种免疫效应机制来检测和对抗病原体。然而,细胞内病原体已经发展出克服巨噬细胞保护性免疫反应并在巨噬细胞内定植的策略。结核病(TB)是由结核分枝杆菌引起的一种全球关注的传染性疾病,包括肺和肺外。M。结核病是一种非常成功的病原体,它已经获得了各种策略来下调巨噬细胞的关键先天效应免疫反应,如吞噬体-溶酶体融合、抗原呈递、自噬和抑制活性氧(ROI)和活性氮(RNI)物种,以确保其在巨噬细胞内存活更长时间。此外,芽孢杆菌还能调节t细胞免疫反应,使芽孢杆菌在宿主体内存活较长时间。在本章中,我们重点描述了重要的巨噬细胞先天防御机制和影响t细胞适应性反应的信号通路,以及杆菌利用这些信号级联来促进其在巨噬细胞内的复制和持续以建立生产性感染所采取的策略。通过巨噬细胞监测它们的安全性,设计合适的干预措施
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引用次数: 11
Mosaic Structure as the Main Feature of Mycobacterium bovis BCG Genomes 镶嵌结构是牛分枝杆菌BCG基因组的主要特征
Pub Date : 2018-06-20 DOI: 10.5772/INTECHOPEN.75005
Voronina Olga Lvovna, Aksenova Ekaterina Ivanovna, KundaMarina Sergeevna, Ryzhova Natalia Nikolaevna, Semenov AndreyNikolaevich, Sharapova Natalia Eugenievna, Gintsburg AlexandrLeonidovich
Background: The genome stability of attenuated live BCG vaccine preventing the acute forms of childhood tuberculosis is an important aspect of vaccine production. The pur pose of our study was a whole genome comparative analysis of BCG sub-strains and identification of potential triggers of sub-strains’ transition. Results: Genomes of three BCG Russia seed lots (1963, 1982, 2006 years) have been sequenced, and the stability of vaccine sub-strain genomes has been confirmed. A com parative genome analysis of nine Mycobacterium bovis BCG and three M. bovis strains revealed their specific genome features associated with prophage profiles. A number of prophage-coded homologs to Caudovirales ORFs were common to all BCG genomes. Prophage profiles of BCG Tice and BCG Montreal genomes were unique and coded homologs to herpes viruses ORFs. The data of phylogenetic analysis of BCG sub-strain groups based on whole genome sequences and genome restriction maps were in con - gruence with prophage profiles. The only fragmentary similarity of specific prophage sequences of BCG Tice, BCG Montreal, and BCG Russia 368 in pair-wise alignments was observed, suggesting the impact of prophages on mosaic structure of genomes. Conclusions: The whole genome sequencing approach is essential for genomes with mosaic structure, harboring numerous prophage sequences. Tools for prophage search are effective instruments in this analysis.
背景:预防儿童急性结核的减毒活疫苗的基因组稳定性是疫苗生产的一个重要方面。本研究的目的是对卡介苗亚株进行全基因组比较分析,并鉴定亚株转变的潜在触发因素。结果:对俄罗斯卡介苗1963年、1982年和2006年三个种子批次的基因组进行了测序,证实了疫苗亚株基因组的稳定性。对9株牛分枝杆菌卡介苗和3株牛分枝杆菌的基因组进行比较分析,揭示了它们与原噬菌体谱相关的特定基因组特征。许多与Caudovirales orf同源的噬菌体编码同源物在所有BCG基因组中都是共同的。BCG Tice和BCG Montreal基因组的噬菌体谱与疱疹病毒orf具有编码同源性。基于全基因组序列和基因组限制性内切图的卡介苗亚株群系统发育分析数据与原噬菌体图谱基本一致。BCG Tice、BCG Montreal和BCG Russia 368的特异前噬菌体序列在两两比对中仅有片段相似,提示前噬菌体对基因组镶嵌结构的影响。结论:全基因组测序方法对含有大量前噬菌体序列的镶嵌结构基因组至关重要。噬菌体搜索工具是这种分析的有效工具。
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引用次数: 1
Clients’ Perception of Quality of Multidrug-Resistant Tuberculosis Treatment and Care in Resource-Limited Setting: Experience from Nigeria 在资源有限的环境下,客户对耐多药结核病治疗和护理质量的感知:来自尼日利亚的经验
Pub Date : 2018-06-20 DOI: 10.5772/INTECHOPEN.76001
O. Oladimeji, D. Adeyinka, LehlogonoloMakola, K. H. Mitonga, E. Udoh, B. Ushie, K. Oladimeji, J. Chikovore, M. Mabaso, A. Adeleke, OsmanEltayeb, Oluwatoyin J. Kuye, G. Mustapha, Olusoji MayowaIge, J. N. Mbatha, J. Creswell, J. Tsoka-Gwegweni, L. Lawson, E. Igumbor
Additional information is available at the end of the chapter Abstract Background: Quality care is essential to the well-being and survival of people with multidrug-resistant tuberculosis (MDR-TB). The aim of this study is to explore how MDR- TB patients, who were voluntarily hospitalized, perceived care and treatment strategy and to assess the influence of psychosocial factors on their perception of care and treatment strategy in Nigeria. Methods: The study enrolled 98 MDR-TB patients on voluntary confinement in four MDR-TB hospitals in Nigeria. Patients ’ perceptions of quality of care and treatment strategy were evaluated with 28-item and 6-item instru- ments, respectively. Bivariate analysis was used to test for an association and multivariate analysis for factors that might contribute to the perceived quality of care. Results: Seventy-eight per cent (78%) of the participating patients perceived the quality of care to be good. Patients with better psychosocial well-being had five times higher odds to report good quality of care. Conclusion: The majority of MDR-TB patients perceived the quality of inpatient care to be good in Nigerian hospitals; however, their psychological health influenced their perception significantly. Health care providers need to improve treatment strategies to encourage acceptance of care as poor perception to health care service delivery may deter treatment completion and also cause relapse among clients on treatment.
背景:高质量的护理对耐多药结核病(MDR-TB)患者的福祉和生存至关重要。本研究旨在探讨尼日利亚自愿住院的耐多药结核病患者如何感知护理和治疗策略,并评估心理社会因素对其感知护理和治疗策略的影响。方法:本研究在尼日利亚4家耐多药结核病医院招募了98名自愿闭月子的耐多药结核病患者。患者对护理质量和治疗策略的感知分别用28项和6项仪器进行评估。双变量分析用于检验可能影响感知护理质量的因素的关联和多变量分析。结果:78%(78%)的参与患者认为护理质量良好。心理健康状况较好的患者报告良好护理质量的几率高出5倍。结论:大多数耐多药结核病患者认为尼日利亚医院的住院护理质量较好;然而,他们的心理健康状况对他们的认知有显著影响。卫生保健提供者需要改进治疗策略,以鼓励接受护理,因为对卫生保健服务提供的不良认识可能会阻碍治疗的完成,也会导致治疗中的客户复发。
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引用次数: 1
Web Resources on Tuberculosis: Information, Research, and Data Analysis 关于结核病的网络资源:信息、研究和数据分析
Pub Date : 2018-03-02 DOI: 10.5772/INTECHOPEN.73549
Edson Machado, C. Cerdeira, A. B. Miranda, M. Catanho
Since the first edition of this book in 2013, many new tools and databases have become publicly available, as well as several have been discontinued. Here, we present an updated version of web resources on tuberculosis, providing more detailed information on some key concepts. However, the purpose of this chapter is by no means to offer an exhaustive list of all the resources available on the Internet about TB, the topic of this book. This would be a massive and perhaps futile work since the evolution of the Internet occurs at a very fast pace. Rather, this chapter concentrates on a selection of the most important, relevant and stable websites with relevance to several aspects of TB, such as research, treatment, main institutions, funding, and specialized platforms. We think this should complement all the other information already presented in this book, offering the reader a more integrated view of the disease, as well as access to new platforms and systems specialized in the analysis of data generated by a series of new technologies such as DNA sequencing.
自2013年本书第一版以来,许多新的工具和数据库已经公开可用,还有一些已经停止使用。在这里,我们提供了一个更新版本的关于结核病的网络资源,提供了一些关键概念的更详细的信息。然而,本章的目的绝不是提供互联网上关于结核病(本书的主题)的所有可用资源的详尽列表。这将是一个巨大的,也许是徒劳的工作,因为互联网的发展速度非常快。相反,本章侧重于选择最重要、最相关和最稳定的网站,这些网站与结核病的几个方面相关,如研究、治疗、主要机构、资助和专业平台。我们认为这应该补充本书中已经介绍的所有其他信息,为读者提供更全面的疾病视图,以及访问专门用于分析由一系列新技术(如DNA测序)产生的数据的新平台和系统。
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引用次数: 1
Patients and Health System-Related Factors Impacting on Tuberculosis Program Implementation in Resource-Constrained Settings: Experience from Multi-TB Facilities in Oyo State, South-West of Nigeria 在资源有限的环境中,患者和卫生系统相关因素影响结核病规划的实施:来自尼日利亚西南部奥约州多结核病设施的经验
Pub Date : 2018-02-23 DOI: 10.5772/INTECHOPEN.73583
O. Oladimeji, J. Tsoka-Gwegweni, L. Mlangeni, L. Makola, Olusegun Awolaran
Background : Tuberculosis (TB) is one of the most prevalent human infections and is the second leading cause of deaths from infectious diseases worldwide, and Nigeria is the fourth among the 22 high-burden countries in the world for tuberculosis even though the exact burden of TB in Nigeria is not known. Methods : The study used exploratory cross-sectional design. A multistage stratified ran - dom sampling technique was used to select 680 participants from 16 DOTS facilities in one state in Nigeria. Results : The results show that 59.25% (410) of individuals believed that the quality of access to care was excellent, 78.44% (542) of individuals believed that the appearance of the healthcare facility they attended was excellent, 75.40% (518) of individuals believed that there were many people accessing healthcare facilities and 82.33% (559) reported that they waited less than 30 minutes at a healthcare facility. Conclusions : Providing good was generally satisfactory. Findings from this study are relevant for policy formation and strategic implementation for TB control program in resource-limited settings. its association with HIV), health literacy (TB-related knowledge and education) and sociocultural (gender roles and status in the family) factors, whereas provider-/system-level barriers include provider’s degree of suspicion for TB, the number and types of providers seen before TB diagnosis, provider adherence to national TB program guidelines and patient satisfaction with TB services [2, 6, 7]. Due to these challenges, a comprehensive understand-ing of barriers is needed in order to provide insight into TB service programs, research and policy. It is against this background that this study was designed to determine individual and provider’s barriers and delays that limit access and adherence to TB services.
背景:结核病是最普遍的人类传染病之一,也是全世界因传染病死亡的第二大原因,尼日利亚是世界上22个结核病高负担国家中的第四大国家,尽管尼日利亚结核病的确切负担尚不清楚。方法:采用探索性横断面设计。采用多阶段分层随机抽样技术,从尼日利亚一个州的16个DOTS设施中选择了680名参与者。结果:59.25%(410人)的个体认为就诊质量优良,78.44%(542人)的个体认为就诊机构外观优良,75.40%(518人)的个体认为就诊人数较多,82.33%(559人)的个体认为就诊时间少于30分钟。结论:提供良好的服务总体上是令人满意的。本研究结果对资源有限环境下结核病控制规划的政策制定和战略实施具有重要意义。其与艾滋病毒的关联)、健康素养(结核病相关知识和教育)和社会文化(性别角色和家庭地位)因素,而提供者/系统层面的障碍包括提供者对结核病的怀疑程度、结核病诊断前见过的提供者的数量和类型、提供者对国家结核病规划指南的遵守程度以及患者对结核病服务的满意度[2,6,7]。由于这些挑战,需要全面了解障碍,以便深入了解结核病服务规划、研究和政策。正是在这种背景下,本研究旨在确定个人和提供者限制获得和坚持结核病服务的障碍和延误。
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引用次数: 2
The Physiology of Mycobacterium tuberculosis in the Context of Drug Resistance: A System Biology Perspective 耐药性背景下结核分枝杆菌的生理学:系统生物学视角
Pub Date : 2017-12-20 DOI: 10.5772/INTECHOPEN.69594
L. Nieto, C. Mehaffy, K. Dobos
Tuberculosis (TB), a disease caused by Mycobacterium tuberculosis ( Mtb ), is the main cause of death due to an infectious disease. After more than 100 years of the discovery of Mtb , clinicians still face difficulties finding an effective treatment for the increasing number of drug-resistant cases. The difficulties in the clinical setting can be related to the slow pace at which the understanding of the physiology of this bacterium has occurred. Mtb is distinct from other microorganisms not only due to its slow growth and difficulties to study in the laboratory, but also due to its inherent physiology such as its complex cell envelope and its metabolic pathways. Understanding the physiology of drug susceptible and resistant Mtb strains is crucial for the design of an effective chemotherapy against TB. This chapter will review the mycobacterial cell envelope and major physiological pathways together with recent discoveries in Mtb drug resistance through different “omics” disciplines.
结核病(TB)是由结核分枝杆菌(Mtb)引起的一种疾病,是一种传染病导致死亡的主要原因。在发现结核分枝杆菌100多年后,临床医生仍然难以找到有效治疗日益增多的耐药病例的方法。临床环境中的困难可能与对这种细菌生理学的理解速度缓慢有关。结核分枝杆菌与其他微生物的区别不仅在于其生长缓慢和难以在实验室进行研究,还在于其固有的生理特征,如复杂的细胞包膜和代谢途径。了解药物敏感和耐药结核分枝杆菌菌株的生理学对设计有效的结核病化疗方案至关重要。本章将回顾分枝杆菌的细胞包膜和主要的生理途径,以及通过不同的“组学”学科在结核分枝杆菌耐药方面的最新发现。
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引用次数: 7
期刊
Mycobacterium - Research and Development
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