基于多重实时聚合酶链反应的蜱传病原体筛选方法

IF 1.2 3区 农林科学 Q4 PARASITOLOGY Acta Parasitologica Pub Date : 2023-08-02 DOI:10.1007/s11686-023-00702-0
Sergio Andres Cardenas-Cadena, Maria Eugenia Castañeda-Lopez, Fabiana Esther Mollinedo-Montaño, Sodel Vazquez-Reyes, Jorge Lara-Arias, Ivan Alberto Marino-Martinez, Iram Pablo Rodriguez-Sanchez, Idalia Garza-Veloz, Margarita L. Martinez-Fierro
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引用次数: 0

摘要

目的建立一种具有成本效益、用户友好的多重实时定量聚合酶链反应(qPCR)方法,用于检测与人类和动物疾病相关的多种蜱传病原体。方法采用PCR方法设计和评价立克次体、伯氏疏螺旋体和埃利希氏体的引物扩增序列,并将单次和多重qPCR方法标准化,分别检测单个病原体和单个反应中的多种病原体。生成阳性对照以确定方法的动态范围。在验证阶段,总共筛选了800个样本,以确定是否存在蜱传病原体。结果单次(多重)PCR检测出埃利希体、伯氏疏螺旋体和立克次体的检出限分别为10份和100份,PCR效率(E)为90 ~ 100%,相关系数(R2)为0.998 ~ 0.996。结论单次qPCR检测3种重要病原菌(埃利希氏体、立克次体和伯氏疏螺旋体)的能力在蜱传疾病分子诊断领域具有显著优势。这一进步对公共卫生产生了深远的影响,因为它有助于选择适当的治疗方案,从而减少与疾病进展相关的并发症。这种方法提供的简化方法简化了诊断过程,能够及时干预,最终改善患者的预后,并减轻与未经治疗或误诊的蜱传感染相关的潜在风险。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Tick-Borne Pathogens Screening Using a Multiplex Real-Time Polymerase Chain Reaction-Based Method

Purpose

This study aims to develop and evaluate a cost-effective, user-friendly multiplex quantitative real-time polymerase chain reaction (qPCR) method for detecting multiple tick-borne pathogens associated with human and veterinary diseases.

Methods

In silico PCR was performed to design and evaluate primer sequences reported for amplifying Rickettsia spp., Borrelia spp., and Ehrlichia spp. Single and multiplex qPCR assays were then standardized to detect individual pathogens and multiple pathogens in a single reaction. Positive controls were generated to determine the dynamic range of the methods. In the validation phase, a total of 800 samples were screened for the presence of tick-borne pathogens.

Results

Identification in a single qPCR reaction (multiplex) of Ehrlichia spp., and Borrelia spp. with a limit of detection of 10 copies and Rickettsia spp. with 100 copies, a PCR efficiency (E) of 90–100% and a coefficient of correlation (R2) of 0.998–0.996 for all pathogens.

Conclusion

The ability to detect three significant pathogens (Ehrlichia spp., Rickettsia spp., and Borrelia spp.) in a single qPCR reaction offers a significant advantage in the field of molecular diagnostics for tick-borne diseases. This advancement has a profound impact on public health as it facilitates the selection of appropriate treatment protocols, thereby reducing complications associated with disease progression. The streamlined approach provided by this method simplifies the diagnostic process and enables timely intervention, ultimately improving patient outcomes and mitigating the potential risks associated with untreated or misdiagnosed tick-borne infections.

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来源期刊
Acta Parasitologica
Acta Parasitologica 医学-寄生虫学
CiteScore
3.10
自引率
6.70%
发文量
149
审稿时长
6-12 weeks
期刊介绍: Acta Parasitologica is an international journal covering the latest advances in the subject. Acta Parasitologica publishes original papers on all aspects of parasitology and host-parasite relationships, including the latest discoveries in biochemical and molecular biology of parasites, their physiology, morphology, taxonomy and ecology, as well as original research papers on immunology, pathology, and epidemiology of parasitic diseases in the context of medical, veterinary and biological sciences. The journal also publishes short research notes, invited review articles, book reviews. The journal was founded in 1953 as "Acta Parasitologica Polonica" by the Polish Parasitological Society and since 1954 has been published by W. Stefanski Institute of Parasitology of the Polish Academy of Sciences in Warsaw. Since 1992 in has appeared as Acta Parasitologica in four issues per year.
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