一种硬核珊瑚(Acropora tenuis)在产卵季节的转录组分析与性腺状况的关系。

IF 0.9 4区 生物学 Q3 ZOOLOGY Zoological Science Pub Date : 2022-12-01 DOI:10.2108/zs220016
Hiroki Takekata, Hirono Hamazato, Tan Ee Suan, Ryotaro Izumi, Hajime Yaguchi, Masatoshi Matsunami, Naoko Isomura, Akihiro Takemura
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引用次数: 1

摘要

同步产卵是珊瑚的一个显著特征。虽然这对繁殖成功很重要,但当珊瑚受到外界刺激受损时,它们会重新分配用于繁殖的能量给生长。为了评估软核珊瑚(Acropora tenuis)产卵前后的转录组,我们于2016年11月在日本冲绳Sesoko岛附近的野外标记了三个菌落(一个漂白和两个未漂白),并于2017年5月至7月每月取样,并进行了RNA测序(RNA- seq)分析。组织学分析显示,先前漂白的蜂群在6月份拥有配子,此时其他两个蜂群已经产卵。在RNA-Seq分析中,基于样本间基因表达相似性的多维尺度反映了菌落之间和月份之间的差异,除了5月份的非产卵菌落样本与6月份的样本相似。基于不同月份间差异表达基因表达模式的分层聚类也显示了5月份非产卵菌落样本与6月份样本的相似性。这些结果表明,不产卵在5月份就已经决定了,5月份不产卵的群体的生理状况提前到了6月份。RNA-Seq分析还显示,与配子体发生相关的基因和与细胞凋亡相关的基因分别在产卵前和产卵后上调。
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Transcriptome Analysis in a Scleractinian Coral, Acropora tenuis, during the Spawning Season With Reference to the Gonadal Condition.

Synchronous spawning is a striking feature of coral. Although it is important for reproductive success, corals reallocate energy for reproduction to growth when they are damaged by external stimuli. To assess the transcriptome before and after spawning in the scleractinian coral Acropora tenuis, we tagged three colonies (one bleached and two unbleached) in the field around Sesoko Island (Okinawa, Japan) in November 2016, sampled them monthly from May to July 2017, and performed RNA sequencing (RNA-Seq) analysis. Histological analysis revealed that the previously bleached colony possessed gametes in June, by which time the other two colonies had already spawned. In RNA-Seq analyses, multi-dimensional scaling based on gene expression similarity among the samples reflected the differences between colonies and between months except for the sample of a non-spawned colony in May, which was similar to the samples in June. The similarity of the non-spawned colony sample in May to the samples in June was also shown in hierarchical clustering based on the expression patterns of the genes that were differentially expressed between months in the spawned colonies. These results suggest that non-spawning was already decided in May, and that the physiological condition in a non-spawned colony in May was advanced to June. RNA-Seq analysis also showed that genes related to gametogenesis and those related to apoptosis were upregulated before and after spawning, respectively.

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来源期刊
Zoological Science
Zoological Science 生物-动物学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
1 months
期刊介绍: Zoological Science is published by the Zoological Society of Japan and devoted to publication of original articles, reviews and editorials that cover the broad field of zoology. The journal was founded in 1984 as a result of the consolidation of Zoological Magazine (1888–1983) and Annotationes Zoologicae Japonenses (1897–1983), the former official journals of the Zoological Society of Japan. Each annual volume consists of six regular issues, one every two months.
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