芯片分析预测Mir-6770-5p可以靶向所有乙型肝炎病毒基因型的X基因

Q4 Agricultural and Biological Sciences International Journal Bioautomation Pub Date : 2023-09-01 DOI:10.7546/ijba.2023.27.3.000915
Amrizal Muchtar, Ramdhani M. Natsir, Minarty M. Natsir, Andi Sitti Fahirah Arsal, Hisashi Iizasa, Hironori Yoshiyama
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引用次数: 0

摘要

迄今为止,针对乙型肝炎病毒(HBV)的有效药物尚未开发出来。MicroRNAs (miRNAs)是一种很有前途的抑制病毒的治疗方法。本研究利用生物信息学软件对miRBase数据库中的1917个mirna进行筛选,获得靶向HBV基因型b的候选mirna。采用配对模式和最小自由能两个参数选择符合条件的mirna。从39个初始候选物中鉴定出3个靶向X基因的miRNA和1个靶向C基因的miRNA。独特的是,miR-6770-5p是唯一可以靶向所有HBV基因型的X基因的候选物,与其他候选物相比具有更高的抑制效力。另外三种候选物对某些基因型也表现出良好的效力;因此,确定的候选药物显示出治疗肝炎感染的希望。
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In silico Analysis Predicts that Mir-6770-5p Can Target the X Gene of All Hepatitis B Virus Genotypes
To date, effective medication against hepatitis B virus (HBV) has not been developed. MicroRNAs (miRNAs) comprise a promising therapeutic approach to inhibit the virus. In this study, 1917 miRNAs in the miRBase database were screened using bioinformatics software to obtain candidates that can target HBV genotype B. Two parameters, namely pairing pattern and minimum free energy were used to select the qualifying miRNAs. Three miRNAs targeting the X gene and one miRNA targeting the C gene were identified out of 39 initial candidates. Uniquely, miR-6770-5p was the only candidate that could target the X gene of all HBV genotypes, with a higher potency of inhibition compared to other candidates. The three other candidates also showed good potency for some genotypes; thus, the identified candidates show promise as therapeutics for hepatitis infection.
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来源期刊
International Journal Bioautomation
International Journal Bioautomation Agricultural and Biological Sciences-Food Science
CiteScore
1.10
自引率
0.00%
发文量
22
审稿时长
12 weeks
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