在偏远的热带森林中,非洲军蚁处于病毒监测的最前沿

Matthieu Fritz, Bérénice Reggiardo, Denis Filloux, Lisa Claude, Emmanuel Fernandez, Frédéric Mahé, Simona Kraberger, Joy M. Custer, Pierre Becquart, Telstar Ndong Mebaley, Linda Bohou Kombila, Léadisaelle H. Lenguiya, Larson Boundenga, Illich M. Mombo, Gael D. Maganga, Fabien R. Niama, Jean-Sylvain Koumba, Mylène Ogliastro, Michel Yvon, Darren P. Martin, Stéphane Blanc, Arvind Varsani, Eric Leroy, Philippe Roumagnac
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引用次数: 0

摘要

在这项研究中,我们使用了一种捕食者激活的宏基因组学策略,对偏远且难以进入的茂密的非洲热带地区的病毒进行了采样。具体来说,我们将研究重点放在了Dorylus属的军蚁的使用上,这些军蚁是强制性的集体觅食者和群体捕食者,它们攻击并压倒了大量的动物猎物。利用从29个菌落收集的209个军蚁样本和基于病毒粒子相关核酸的宏基因组学方法,我们发现军蚁积累了广泛的细菌、植物、无脊椎动物和脊椎动物病毒序列:包括56个病毒科157个不同病毒属的序列。这表明,利用捕食者和食腐动物(如军蚁)对热带森林病毒群进行大面积采样,可以揭示这些复杂且难以进入的生态系统中病毒种群的组成和结构。
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African army ants at the forefront of virome surveillance in a remote tropical forest
In this study, we used a predator-enabled metagenomics strategy to sample the virome of a remote and difficult-to-access densely forested African tropical region. Specifically, we focused our study on the use of army ants of the genus Dorylus that are obligate collective foragers and group predators that attack and overwhelm a broad array of animal prey. Using 209 army ant samples collected from 29 colonies and the virion-associated nucleic acid-based metagenomics approach, we showed that a broad diversity of bacterial, plant, invertebrate and vertebrate viral sequences were accumulated by army ants: including sequences from 157 different viral genera in 56 viral families. This suggests that using predators and scavengers such as army ants to sample broad swathes of tropical forest viromes can shed light on the composition and the structure of viral populations of these complex and inaccessible ecosystems.
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