MFG-E8:与ps结合蛋白相关的多种结合模式的模型。

IF 1.8 4区 物理与天体物理 Q4 CHEMISTRY, PHYSICAL The European Physical Journal E Pub Date : 2023-11-24 DOI:10.1140/epje/s10189-023-00372-w
Tiffany Suwatthee, Daniel Kerr, Sofiya Maltseva, Charles L. Dulberger, Luke Hyeondo Hwang, Benjamin R. Slaw, Wei Bu, Binhua Lin, Erin J. Adams, Ka Yee C. Lee
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引用次数: 0

摘要

膜结合蛋白通常通过单一的结合界面与脂质膜结合,这种结合界面通常被建模为两种状态系统:结合或未结合。然而,即使是单个接口也可以使用多种绑定模式,因为各种交互都可能导致绑定事件。不幸的是,现有的模型无法清晰地描述单一绑定接口的不同绑定模式。在这里,我们提出了一项关于乳脂球EGF因子8 (MFG-E8)的研究,它属于一类识别和结合磷脂酰丝氨酸(PS)的蛋白质。这些蛋白检测与暴露于凋亡和恶性细胞的PS有关的膜失调。为了阐明影响MFG-E8结合的因素,我们使用了一个由一系列具有不同PS摩尔分数的脂质囊泡组成的模型系统,使用色氨酸荧光光谱位移法确定MFG-E8的结合亲和力对静电变化的敏感性。使用一个新开发的模型,我们通过实验确定了三种结合模式,每种模式都与不同数量的PS脂质相关,其结合的协同性被带负电荷的脂质的可用性增强。x射线反射率实验还表明MFG-E8的结合模式受膜填料的影响。为阐明MFG-E8在不同膜条件下与脂质膜的相互作用而建立的协议可以应用于研究其他针对特定膜属性(如流动性和静电)的膜结合蛋白,并有助于阐明这些膜靶向机制及其随后的结合事件。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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MFG-E8: a model of multiple binding modes associated with ps-binding proteins

Membrane-binding proteins often associate with lipid membranes through a singular binding interface which is generally modeled as a two-state system: bound or unbound. However, even a single interface can engage with more than one mode of binding since a variety of interactions can contribute to the binding event. Unfortunately, the ability to clearly delineate the different binding modes of a singular binding interface has been elusive with existing models. Here, we present a study on milk fat globule EGF factor 8 (MFG-E8), which belongs to a class of proteins that identifies and binds phosphatidylserine (PS). These proteins detect membrane dysregulation implicated in exposed PS in apoptosis and malignant cells. In order to elucidate the factors affecting the binding of MFG-E8, we used a model system consisting of a series of lipid vesicles with varying PS mole fraction to identify the sensitivity of MFG-E8’s binding affinity to changes in electrostatics using a tryptophan fluorescence spectral shift assay. Using a newly developed model, we experimentally identified three binding modes, each associated with a different number of PS lipids, with its cooperativity for binding being enhanced by the availability of negatively charged lipids. X-ray reflectivity experiments additionally suggest that MFG-E8’s binding modes are influenced by membrane packing. The protocols established for elucidating MFG-E8’s interaction with lipid membranes under different membrane conditions can be applied to the study of other membrane-binding proteins that target specific membrane attributes, such as fluidity and electrostatics, and help elucidate these membrane targeting mechanisms and their subsequent binding events.

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来源期刊
The European Physical Journal E
The European Physical Journal E CHEMISTRY, PHYSICAL-MATERIALS SCIENCE, MULTIDISCIPLINARY
CiteScore
2.60
自引率
5.60%
发文量
92
审稿时长
3 months
期刊介绍: EPJ E publishes papers describing advances in the understanding of physical aspects of Soft, Liquid and Living Systems. Soft matter is a generic term for a large group of condensed, often heterogeneous systems -- often also called complex fluids -- that display a large response to weak external perturbations and that possess properties governed by slow internal dynamics. Flowing matter refers to all systems that can actually flow, from simple to multiphase liquids, from foams to granular matter. Living matter concerns the new physics that emerges from novel insights into the properties and behaviours of living systems. Furthermore, it aims at developing new concepts and quantitative approaches for the study of biological phenomena. Approaches from soft matter physics and statistical physics play a key role in this research. The journal includes reports of experimental, computational and theoretical studies and appeals to the broad interdisciplinary communities including physics, chemistry, biology, mathematics and materials science.
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