Otolith microchemistry combined with genetics reveal patterns of straying and population connectivity in anadromous brown trout (Salmo trutta)

Salmonids are well known for their natal homing behaviour, meaning they return to breed in the same area where they originated. However, not all individuals return to their natal breeding grounds—a behavioural trait known as straying. The prevalence of straying is difficult to explore and therefore quantitative estimates for straying are seldom reported. In this study, otolith microchemistry and genetics were combined to investigate patterns of straying over ecological and evolutionary time, respectively, between neighbouring rivers flowing into Mariager fjord, Denmark. Otolith microchemistry was used to determine the river of origin for sea trout (Salmo trutta) upon their return to freshwater and 288 SNP markers were used to determine genetic structure among the rivers in the fjord. In this system, where the distance between rivers is short, otolith microchemistry achieved 80% accuracy in assigning juvenile brown trout to their natal river, thus allowing us to determine that approximately 43% of the adult sea trout had returned to non-natal rivers to spawn, with a similar proportion of strayers and natal homers in all of the rivers. Genetic analysis further supported that there was substantial gene flow among individuals originating from different rivers, indicating that sea trout in Mariager fjord make up one population. The findings obtained from otolith microchemistry and genetics complement each other and provide further evidence that sea trout in this system migrate to non-natal rivers and spawn there, which consequently affects the genetic structure of the population.