花青素生物合成过程中 bZIP 和 WRKY 基因家族的鉴定和表达分析

IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Horticulture Environment and Biotechnology Pub Date : 2024-01-16 DOI:10.1007/s13580-023-00551-w
Cuihua Gu, Sidan Hong, Jie Wang, Linxue Shang, Guozhe Zhang, Yu Zhao, Qingqing Ma, Dandan Ma
{"title":"花青素生物合成过程中 bZIP 和 WRKY 基因家族的鉴定和表达分析","authors":"Cuihua Gu, Sidan Hong, Jie Wang, Linxue Shang, Guozhe Zhang, Yu Zhao, Qingqing Ma, Dandan Ma","doi":"10.1007/s13580-023-00551-w","DOIUrl":null,"url":null,"abstract":"<p><i>Lagerstroemia indica</i> is a summer ornamental flowering tree, belonging to the Lythraceae family. Its flower color is a key ornamental characteristic. Recent research indicates that WRKY and bZIP transcription factors play important role in flower color formation. Based on the transcriptome database of <i>L. indica</i>, this study identified 85 <i>LibZIPs</i> and 61 <i>LiWRKYs</i> from the <i>L. indica</i> transcriptome database and analyzed their expression profiles using qRT-PCR. Phylogenetic analysis divided <i>LibZIPs</i> into 11 subfamilies and <i>LiWRKYs</i> into six subfamilies. Nine <i>LibZIPs</i> and four <i>LiWRKYs</i> were found to have higher expression in colored samples compared to the white sample. <i>LibZIP31</i>, <i>LibZIP65</i>, <i>LibZIP34</i>, <i>LiWRKY16</i>, <i>LiWRKY25</i>, <i>LiWRKY40</i>, and <i>LiWRKY67</i> may play important roles in flower color formation in <i>L. indica</i>. These results provide valuable information for further functional analysis of the bZIP and WRKY genes families in <i>L. indica</i> and help clarify their roles in flower color formation.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":"30 1","pages":""},"PeriodicalIF":2.4000,"publicationDate":"2024-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification and expression analysis of the bZIP and WRKY gene families during anthocyanins biosynthesis in Lagerstroemia indica L\",\"authors\":\"Cuihua Gu, Sidan Hong, Jie Wang, Linxue Shang, Guozhe Zhang, Yu Zhao, Qingqing Ma, Dandan Ma\",\"doi\":\"10.1007/s13580-023-00551-w\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><i>Lagerstroemia indica</i> is a summer ornamental flowering tree, belonging to the Lythraceae family. Its flower color is a key ornamental characteristic. Recent research indicates that WRKY and bZIP transcription factors play important role in flower color formation. Based on the transcriptome database of <i>L. indica</i>, this study identified 85 <i>LibZIPs</i> and 61 <i>LiWRKYs</i> from the <i>L. indica</i> transcriptome database and analyzed their expression profiles using qRT-PCR. Phylogenetic analysis divided <i>LibZIPs</i> into 11 subfamilies and <i>LiWRKYs</i> into six subfamilies. Nine <i>LibZIPs</i> and four <i>LiWRKYs</i> were found to have higher expression in colored samples compared to the white sample. <i>LibZIP31</i>, <i>LibZIP65</i>, <i>LibZIP34</i>, <i>LiWRKY16</i>, <i>LiWRKY25</i>, <i>LiWRKY40</i>, and <i>LiWRKY67</i> may play important roles in flower color formation in <i>L. indica</i>. These results provide valuable information for further functional analysis of the bZIP and WRKY genes families in <i>L. indica</i> and help clarify their roles in flower color formation.</p>\",\"PeriodicalId\":13123,\"journal\":{\"name\":\"Horticulture Environment and Biotechnology\",\"volume\":\"30 1\",\"pages\":\"\"},\"PeriodicalIF\":2.4000,\"publicationDate\":\"2024-01-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Horticulture Environment and Biotechnology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.1007/s13580-023-00551-w\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Horticulture Environment and Biotechnology","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.1007/s13580-023-00551-w","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

摘要

Lagerstroemia indica 是一种夏季观赏花木,属于杓兰科。其花色是主要的观赏特征。最新研究表明,WRKY 和 bZIP 转录因子在花色形成中起着重要作用。本研究以杓兰转录组数据库为基础,从杓兰转录组数据库中鉴定了 85 个 LibZIP 和 61 个 LiWRKY,并利用 qRT-PCR 分析了它们的表达谱。系统进化分析将 LibZIPs 分成 11 个亚科,LiWRKYs 分成 6 个亚科。与白色样本相比,9 个 LibZIPs 和 4 个 LiWRKYs 在有色样本中的表达量更高。LibZIP31、LibZIP65、LibZIP34、LiWRKY16、LiWRKY25、LiWRKY40 和 LiWRKY67 可能在籼稻花色形成中发挥重要作用。这些结果为进一步对籼稻中的 bZIP 和 WRKY 基因家族进行功能分析提供了有价值的信息,并有助于明确它们在花色形成中的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Identification and expression analysis of the bZIP and WRKY gene families during anthocyanins biosynthesis in Lagerstroemia indica L

Lagerstroemia indica is a summer ornamental flowering tree, belonging to the Lythraceae family. Its flower color is a key ornamental characteristic. Recent research indicates that WRKY and bZIP transcription factors play important role in flower color formation. Based on the transcriptome database of L. indica, this study identified 85 LibZIPs and 61 LiWRKYs from the L. indica transcriptome database and analyzed their expression profiles using qRT-PCR. Phylogenetic analysis divided LibZIPs into 11 subfamilies and LiWRKYs into six subfamilies. Nine LibZIPs and four LiWRKYs were found to have higher expression in colored samples compared to the white sample. LibZIP31, LibZIP65, LibZIP34, LiWRKY16, LiWRKY25, LiWRKY40, and LiWRKY67 may play important roles in flower color formation in L. indica. These results provide valuable information for further functional analysis of the bZIP and WRKY genes families in L. indica and help clarify their roles in flower color formation.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Horticulture Environment and Biotechnology
Horticulture Environment and Biotechnology Agricultural and Biological Sciences-Horticulture
CiteScore
4.30
自引率
4.20%
发文量
0
审稿时长
6 months
期刊介绍: Horticulture, Environment, and Biotechnology (HEB) is the official journal of the Korean Society for Horticultural Science, was launched in 1965 as the "Journal of Korean Society for Horticultural Science". HEB is an international journal, published in English, bimonthly on the last day of even number months, and indexed in Biosys Preview, SCIE, and CABI. The journal is devoted for the publication of original research papers and review articles related to vegetables, fruits, ornamental and herbal plants, and covers all aspects of physiology, molecular biology, biotechnology, protected cultivation, postharvest technology, and research in plants related to environment.
期刊最新文献
Alternating red-blue light alleviated physiological injury by reducing oxidative stress under both high light and continuous light from red-blue LEDs Comparative chloroplast genomic analysis of an important horticultural plant, Dendrobium sulcatum (Orchidaceae) and phylogenetic position in Dendrobium Triple-color FISH chromosome constitution and genome size analyses confirmed the ploidy of newly developed ten Hibiscus Sp. Cultivars with different breeding history The potential of coated iron nanoparticles for modulating of negative effects of salinity stress in Ajowan Impact of pre-harvest application of 1-methylcyclopropene (1-MCP) on fruit quality, physiological disorders and respiration rate of ‘Scilate’ apple
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1