对线粒体相关基因的全面分析表明,PPP2R2B 是一种新型生物标记物,可通过 Wnt 信号通路促进膀胱癌的进展

IF 5.7 2区 生物学 Q1 BIOLOGY Biology Direct Pub Date : 2024-02-26 DOI:10.1186/s13062-024-00461-6
Du Shen, Shaosan Kang
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引用次数: 0

摘要

膀胱癌(BC)分别是全球第四大和第十大最常见的男性和女性恶性肿瘤。膀胱癌背后复杂的分子生物学机制是导致该疾病缺乏有效治疗方法的主要原因。线粒体逆行控制和线粒体-核交叉对话对 BC 的发生和发展有影响。然而,线粒体相关基因在 BC 中的作用仍不清楚。本研究分析了TCGA数据集,在BC样本中发现了752个DE-MRGs,包括313个下调的MRGs和439个上调的MRGs。然后,机器学习结果筛选出了四个关键诊断基因,包括GLRX2、NMT1、PPP2R2B和TRAF3IP3。此外,我们还分析了这些基因的预后价值,证实只有PPP2R2B与BC患者的临床预后相关,Cox回归实验也验证了PPP2R2B的表达是BC患者总生存期的一个明显预测因子。随后,我们进行了 RT-PCR,发现在 BC 标本和细胞系中,PPP2R2B 的表达明显下降。功能实验显示,过表达 PPP2R2B 可通过 Wnt 信号通路明显抑制 BC 细胞的增殖、迁移和侵袭。总之,这些研究结果为诊断和预后 BC 提供了潜在的分子标记,其中 PPP2R2B 的发现尤其具有重要的生物学和临床意义。这项研究为今后深入研究 BC 的分子机制、开发新的诊断标志物和治疗靶点提供了宝贵的线索。
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Comprehensive analysis of mitochondria-related genes indicates that PPP2R2B is a novel biomarker and promotes the progression of bladder cancer via Wnt signaling pathway
Bladder cancer (BC) is the fourth and tenth most common malignancy in men and women worldwide, respectively. The complexity of the molecular biological mechanism behind BC is a major contributor to the lack of effective treatment management of the disease. The development and genesis of BC are influenced by mitochondrial retrograde control and mitochondria-nuclear cross-talk. However, the role of mitochondrial-related genes in BC remains unclear. In this study, we analyzed TCGA datasets and identified 752 DE-MRGs in BC samples, including 313 down-regulated MRGs and 439 up-regulated MRGs. Then, the results of machine-learning screened four critical diagnostic genes, including GLRX2, NMT1, PPP2R2B and TRAF3IP3. Moreover, we analyzed their prognostic value and confirmed that only PPP2R2B was associated with clinical prognosis of BC patients and Cox regression assays validated that PPP2R2B expression was a distinct predictor of overall survival in BC patients. Them, we performed RT-PCR and found that PPP2R2B expression was distinctly decreased in BC specimens and cell lines. Functional experiments revealed that overexpression of PPP2R2B distinctly suppressed the proliferation, migration and invasion of BC cells via Wnt signaling pathway. In summary, these research findings offer potential molecular markers for the diagnosis and prognosis of BC, with the discovery of PPP2R2B particularly holding significant biological and clinical significance. This study provides valuable clues for future in-depth investigations into the molecular mechanisms of BC, as well as the development of new diagnostic markers and therapeutic targets.
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来源期刊
Biology Direct
Biology Direct 生物-生物学
CiteScore
6.40
自引率
10.90%
发文量
32
审稿时长
7 months
期刊介绍: Biology Direct serves the life science research community as an open access, peer-reviewed online journal, providing authors and readers with an alternative to the traditional model of peer review. Biology Direct considers original research articles, hypotheses, comments, discovery notes and reviews in subject areas currently identified as those most conducive to the open review approach, primarily those with a significant non-experimental component.
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