E. I. Lebedeva, A. T. Shchastniy, A. S. Babenka, D. A. Zinovkin
{"title":"肝纤维化分子机制中 Cxcl12、Tweak、Notch1 和 Yap mRNA 表达水平之间的关系","authors":"E. I. Lebedeva, A. T. Shchastniy, A. S. Babenka, D. A. Zinovkin","doi":"10.1134/s0026893324010060","DOIUrl":null,"url":null,"abstract":"<h3 data-test=\"abstract-sub-heading\">Abstract</h3><p>Current data on the molecular mechanisms of liver fibrosis and cirrhosis fail to fully explain all stages of their development. Interactions between individual genes and signaling pathways are known to play an important role in their functions. However, data on their relationships are insufficient and often contradictory. For the first time, mRNA expression of <i>Notch1, Notch2, Yap1, Tweak (Tnfsf12), Fn14 (Tnfrsf12a), Ang, Vegfa, Cxcl12 (Sdf), Nos2,</i> and <i>Mmp-9</i> was studied in detail at several stages of thioacetamide-induced liver fibrosis in Wistar rats. A factor analysis isolated three factors, which combined highly correlated target genes. The first factor included four genes: <i>Cxcl12</i> (<i>r</i> = 0.829, <i>p</i> < 0.05), <i>Tweak</i> (<i>r</i> = 0.841, <i>p</i> < 0.05), <i>Notch1</i> (<i>r</i> = 0.848, <i>p</i> < 0.05), and <i>Yap1</i> (<i>r</i> = 0.921, <i>p</i> < 0.05). The second factor described the correlation between <i>Mmp-9</i> (<i>r</i> = 0.791, <i>p</i> < 0.05) and <i>Notch2</i> (<i>r</i> = 0.836, <i>p</i> < 0.05). The third factor included <i>Ang</i> (<i>r</i> = 0.748, <i>p</i> < 0.05) and <i>Vegfa</i> (<i>r</i> = 0.679, <i>p</i> < 0.05). The <i>Nos2</i> and <i>Fn14</i> genes were not included in any of the factors. The gene grouping by mRNA expression levels made it possible to assume a pathogenetic relationship between their products in the development of fibrotic changes due to liver toxicity.</p>","PeriodicalId":18734,"journal":{"name":"Molecular Biology","volume":null,"pages":null},"PeriodicalIF":1.5000,"publicationDate":"2024-03-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Relationships between Cxcl12, Tweak, Notch1, and Yap mRNA Expression Levels in Molecular Mechanisms of Liver Fibrogenesis\",\"authors\":\"E. I. Lebedeva, A. T. Shchastniy, A. S. Babenka, D. A. Zinovkin\",\"doi\":\"10.1134/s0026893324010060\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<h3 data-test=\\\"abstract-sub-heading\\\">Abstract</h3><p>Current data on the molecular mechanisms of liver fibrosis and cirrhosis fail to fully explain all stages of their development. Interactions between individual genes and signaling pathways are known to play an important role in their functions. However, data on their relationships are insufficient and often contradictory. For the first time, mRNA expression of <i>Notch1, Notch2, Yap1, Tweak (Tnfsf12), Fn14 (Tnfrsf12a), Ang, Vegfa, Cxcl12 (Sdf), Nos2,</i> and <i>Mmp-9</i> was studied in detail at several stages of thioacetamide-induced liver fibrosis in Wistar rats. A factor analysis isolated three factors, which combined highly correlated target genes. The first factor included four genes: <i>Cxcl12</i> (<i>r</i> = 0.829, <i>p</i> < 0.05), <i>Tweak</i> (<i>r</i> = 0.841, <i>p</i> < 0.05), <i>Notch1</i> (<i>r</i> = 0.848, <i>p</i> < 0.05), and <i>Yap1</i> (<i>r</i> = 0.921, <i>p</i> < 0.05). The second factor described the correlation between <i>Mmp-9</i> (<i>r</i> = 0.791, <i>p</i> < 0.05) and <i>Notch2</i> (<i>r</i> = 0.836, <i>p</i> < 0.05). The third factor included <i>Ang</i> (<i>r</i> = 0.748, <i>p</i> < 0.05) and <i>Vegfa</i> (<i>r</i> = 0.679, <i>p</i> < 0.05). The <i>Nos2</i> and <i>Fn14</i> genes were not included in any of the factors. The gene grouping by mRNA expression levels made it possible to assume a pathogenetic relationship between their products in the development of fibrotic changes due to liver toxicity.</p>\",\"PeriodicalId\":18734,\"journal\":{\"name\":\"Molecular Biology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.5000,\"publicationDate\":\"2024-03-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Molecular Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1134/s0026893324010060\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1134/s0026893324010060","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Relationships between Cxcl12, Tweak, Notch1, and Yap mRNA Expression Levels in Molecular Mechanisms of Liver Fibrogenesis
Abstract
Current data on the molecular mechanisms of liver fibrosis and cirrhosis fail to fully explain all stages of their development. Interactions between individual genes and signaling pathways are known to play an important role in their functions. However, data on their relationships are insufficient and often contradictory. For the first time, mRNA expression of Notch1, Notch2, Yap1, Tweak (Tnfsf12), Fn14 (Tnfrsf12a), Ang, Vegfa, Cxcl12 (Sdf), Nos2, and Mmp-9 was studied in detail at several stages of thioacetamide-induced liver fibrosis in Wistar rats. A factor analysis isolated three factors, which combined highly correlated target genes. The first factor included four genes: Cxcl12 (r = 0.829, p < 0.05), Tweak (r = 0.841, p < 0.05), Notch1 (r = 0.848, p < 0.05), and Yap1 (r = 0.921, p < 0.05). The second factor described the correlation between Mmp-9 (r = 0.791, p < 0.05) and Notch2 (r = 0.836, p < 0.05). The third factor included Ang (r = 0.748, p < 0.05) and Vegfa (r = 0.679, p < 0.05). The Nos2 and Fn14 genes were not included in any of the factors. The gene grouping by mRNA expression levels made it possible to assume a pathogenetic relationship between their products in the development of fibrotic changes due to liver toxicity.
期刊介绍:
Molecular Biology is an international peer reviewed journal that covers a wide scope of problems in molecular, cell and computational biology including genomics, proteomics, bioinformatics, molecular virology and immunology, molecular development biology, molecular evolution and related areals. Molecular Biology publishes reviews, experimental and theoretical works. Every year, the journal publishes special issues devoted to most rapidly developing branches of physical-chemical biology and to the most outstanding scientists.