嗜血疾病传播媒介的元转录组学及相关研究现状

Christina B. McCarthy
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摘要

由于各种普遍因素,包括无计划的城市化、人类流动性的增加、环境变化、病媒对杀虫剂的抗药性以及病原体的不断演变,许多病媒传播疾病(VBDs)的发病率最近出现了惊人的增长。在此背景下,世界卫生组织(WHO)将有效和可持续的病媒控制重新定位为预防和消除 VBDs 的关键方法。研究表明,微生物组影响着蚊子、沙蝇、采采蝇、三齿蝇和蜱等疾病传播媒介的发育、营养和病原体防御。因此,了解病媒生物学的内源调控有助于开发有效的病媒控制方法。在这方面,元转录组学方法可分析环境样本中所有表达的 RNA(元 RNA),从而揭示微生物组的代谢活动如何影响病媒生物学。本综述广泛分析了一些主要食血疾病传播节肢动物的微生物和病毒研究文献,重点关注使用新一代测序(NGS)方法的研究。由于这些 "元测序分析 "的术语尚未达成共识,因此本文提出了这些术语的定义,以便为系统整理本文分析的每种虫媒生物的可用信息提供框架,从而将元转录组分析单列出来。最后,针对其中一些传播血液疾病的节肢动物确定了关键的知识缺口,这将证明对推动未来的研究非常有用。
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CURRENT STATUS OF METATRANSCRIPTOMIC AND RELATED STUDIES IN HEMATOPHAGOUS DISEASE-TRANSMITTING VECTORS
The incidence of numerous vector-borne diseases (VBDs) has recently increased alarmingly due to various widespread factors, including unplanned urbanization, greater human mobility, environmental changes, vector resistance to insecticides, and evolving pathogens. In this context, the World Health Organization (WHO) has repositioned effective and sustainable vector control as a key approach to prevent and eliminate VBDs. It has been shown that the microbiome influences development, nutrition, and pathogen defense in disease-transmitting vectors such as mosquitoes, sandflies, tsetse flies, triatomine bugs, and ticks. Consequently, understanding the endogenous regulation of vector biology can aid in developing effective approaches for vector control. In this respect, a metatranscriptomic approach analyzes all the expressed RNAs in an environmental sample (meta-RNAs) and can thus reveal how the metabolic activities of the microbiome influence vector biology. This review includes an extensive analysis of available literature on microbial and viral studies for some of the major hematophagous disease-transmitting arthropods, with a focus on studies that used next generation sequencing (NGS) approaches. Since a consensus terminology for these “meta-sequencing analyses” has not yet been established, a definition of these terms is presented here to provide the framework for systematically sorting the available information for each of the VBDs analyzed here to single out metatranscriptomic analyses. Finally, key gaps in knowledge were identified for some of these hematophagous disease-transmitting arthropods which will prove very useful for driving future studies.
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