微oleus sp.全基因组中的生物合成基因簇和 Anatoxin-a 检测HI-ES

Hiba Khaleel Saeed, E. Alsammak, M. Haddad, Igor Ivanovski
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摘要

众所周知,蓝藻是一类能产生多种生物活性代谢产物以及多种蓝藻毒素(如锐毒素)的微生物。本研究利用 antiSMASH 6.0 工具,在微oleus sp. HI-ES 的全基因组序列中对负责生产生物活性次生化合物的生物合成基因簇(BGCs)进行了基因鉴定。此外,还利用 RAST 工具和 NCBI 数据库鉴定了负责产生锐毒素的基因序列。研究结果表明,Microcoleus sp. HI-ES 含有 10 个 BGCs,分别负责 NRPS-like、NRPS、间苯二酚、萜烯和 T1PKS。此外,还讨论了这些 BGCs 的制药影响和生物活性。在微oleus sp. HI-ES 基因组中检测到的锐毒毒素基因序列与 Oscillatoria nigroviridis PCC 7112、Planktothrix agardhii、Microcoleus sp、
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Biosynthetic Gene Clusters and Anatoxin-a Detection in a Whole Genome of Microcoleus sp.. HI-ES
Cyanobacteria is a group of microorganisms that are known to produce a wide range of biologically active metabolites as well as a wide range of cyanotoxins such as anatoxins. In this study, the biosynthetic gene clusters (BGCs) that are responsible for bioactive secondary compounds production were genetically identified in the whole genome sequence of Microcoleus sp. HI-ES using antiSMASH 6.0 tool. Moreover, the gene sequence that is responsible for anatoxin production was also identified using both RAST tool and the NCBI database. The results have revealed that Microcoleus sp. HI-ES harbor 10 BGCs responsible for NRPS-like, NRPS, resorcinol, terpenes and T1PKS. The pharmaceutical impacts and the biological activities of these BGCs were also discussed. The anatoxin gene sequences detected in Microcoleus sp. HI-ES genome was closest homology to anatoxin gene sequences in Oscillatoria nigroviridis PCC 7112, Planktothrix agardhii ,
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