{"title":"Ppomicsdb:用于鸽子豆遗传和分子育种应用的多组元数据库","authors":"Nisha Singh, Megha Ujinwal, Nagendra Kumar Singh","doi":"10.1002/leg3.220","DOIUrl":null,"url":null,"abstract":"<p><i>Cajanus cajan</i>, commonly known as Arhar or tur in India, is a highly treasured plant species belonging to the Fabaceae family. Pigeonpea is a drought-tolerant legume crop produced in the world's tropics and subtropics areas, rich source of protein, carbohydrates, fiber, and minerals. It is considered as “meat for vegetarian people” and addresses malnutrition issues globally. Despite its nutritional and economic importance, the lack of comprehensive knowledge about its genomic resources prevents it from being used wisely through molecular breeding programs and biotechnological intervention. Several genomic repositories on pigeonpea are available; however, there is no cohesive integrated multi-omics database available for <i>C. cajan</i>. Here, we present a first report on comprehensive pigeonpea omics database, named as <i>Ppomics database</i> (db) available at https://ppomics.multiwebx.com/, which provides up-to-date various aspects of multi-omics information devoted to the catalogs phenomics (both qualitative and quantitative), genomics, transcriptomics, and proteomics data. <i>Ppomics</i> db is an integrated multi-omics platform for discovering important regulators of several qualitative and quantitative traits in pigeonpea, which can be utilized for superior breed development. <i>Ppomics</i> db has been made available to researchers to acquire the related omics information and perform multi-omics data analysis.</p>","PeriodicalId":17929,"journal":{"name":"Legume Science","volume":"6 2","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/leg3.220","citationCount":"0","resultStr":"{\"title\":\"Ppomicsdb: A Multi-Omics Database for Genetic and Molecular Breeding Applications in Pigeonpea\",\"authors\":\"Nisha Singh, Megha Ujinwal, Nagendra Kumar Singh\",\"doi\":\"10.1002/leg3.220\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><i>Cajanus cajan</i>, commonly known as Arhar or tur in India, is a highly treasured plant species belonging to the Fabaceae family. Pigeonpea is a drought-tolerant legume crop produced in the world's tropics and subtropics areas, rich source of protein, carbohydrates, fiber, and minerals. It is considered as “meat for vegetarian people” and addresses malnutrition issues globally. Despite its nutritional and economic importance, the lack of comprehensive knowledge about its genomic resources prevents it from being used wisely through molecular breeding programs and biotechnological intervention. Several genomic repositories on pigeonpea are available; however, there is no cohesive integrated multi-omics database available for <i>C. cajan</i>. Here, we present a first report on comprehensive pigeonpea omics database, named as <i>Ppomics database</i> (db) available at https://ppomics.multiwebx.com/, which provides up-to-date various aspects of multi-omics information devoted to the catalogs phenomics (both qualitative and quantitative), genomics, transcriptomics, and proteomics data. <i>Ppomics</i> db is an integrated multi-omics platform for discovering important regulators of several qualitative and quantitative traits in pigeonpea, which can be utilized for superior breed development. <i>Ppomics</i> db has been made available to researchers to acquire the related omics information and perform multi-omics data analysis.</p>\",\"PeriodicalId\":17929,\"journal\":{\"name\":\"Legume Science\",\"volume\":\"6 2\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-04-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1002/leg3.220\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Legume Science\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/leg3.220\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Legume Science","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/leg3.220","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0
摘要
Cajanus cajan 在印度俗称 Arhar 或 tur,是一种非常珍贵的豆科植物。鸽子豆是一种产于世界热带和亚热带地区的耐旱豆科作物,含有丰富的蛋白质、碳水化合物、纤维和矿物质。它被视为 "素食者的肉食",可解决全球营养不良问题。尽管它具有重要的营养和经济价值,但由于缺乏对其基因组资源的全面了解,无法通过分子育种计划和生物技术干预对其进行合理利用。目前已有多个鸽子豆基因组资源库,但还没有针对 C. cajan 的统一的多组学综合数据库。在此,我们首次报告了一个全面的鸽子豆 omics 数据库,名为 Ppomics 数据库 (db),可在 https://ppomics.multiwebx.com/ 上查阅,该数据库提供了多组学各方面的最新信息,专门用于表型组学(定性和定量)、基因组学、转录组学和蛋白质组学数据的编目。Ppomics db 是一个集成的多组学平台,用于发现鸽子豆多个定性和定量性状的重要调节因子,可用于优良品种的开发。Ppomics db 可供研究人员获取相关的组学信息并进行多组学数据分析。
Ppomicsdb: A Multi-Omics Database for Genetic and Molecular Breeding Applications in Pigeonpea
Cajanus cajan, commonly known as Arhar or tur in India, is a highly treasured plant species belonging to the Fabaceae family. Pigeonpea is a drought-tolerant legume crop produced in the world's tropics and subtropics areas, rich source of protein, carbohydrates, fiber, and minerals. It is considered as “meat for vegetarian people” and addresses malnutrition issues globally. Despite its nutritional and economic importance, the lack of comprehensive knowledge about its genomic resources prevents it from being used wisely through molecular breeding programs and biotechnological intervention. Several genomic repositories on pigeonpea are available; however, there is no cohesive integrated multi-omics database available for C. cajan. Here, we present a first report on comprehensive pigeonpea omics database, named as Ppomics database (db) available at https://ppomics.multiwebx.com/, which provides up-to-date various aspects of multi-omics information devoted to the catalogs phenomics (both qualitative and quantitative), genomics, transcriptomics, and proteomics data. Ppomics db is an integrated multi-omics platform for discovering important regulators of several qualitative and quantitative traits in pigeonpea, which can be utilized for superior breed development. Ppomics db has been made available to researchers to acquire the related omics information and perform multi-omics data analysis.