非线性混合效应模型中有限距离的不确定性计算--基于 Metropolis-Hastings 算法的新方法

IF 5 3区 医学 Q1 PHARMACOLOGY & PHARMACY AAPS Journal Pub Date : 2024-04-23 DOI:10.1208/s12248-024-00905-x
Mélanie Guhl, Julie Bertrand, Lucie Fayette, François Mercier, Emmanuelle Comets
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引用次数: 0

摘要

非线性混合效应模型(NLMEM)中人口参数向量的最大似然估计值(MLE)的标准误差(SE)通常使用费雪信息矩阵(FIM)的逆矩阵来估计。然而,在有限距离内,即远离渐近线时,FIM 可能会低估 NLMEM 参数的 SE。另外,在 Stan 中通过汉密尔顿蒙特卡洛算法获得的后验分布的标准偏差已被证明是 SE 的替代值,因为在先验的某些规则性条件下,MLE 的极限分布和贝叶斯框架中最大后验估计器的极限分布是等价的。在这项工作中,我们开发了一种类似的方法,使用 Metropolis-Hastings (MH) 算法与随机逼近期望最大化 (SAEM) 算法并行,在 saemix R 软件包中实现。我们在不同的模拟场景和实际案例研究数据中对该方法进行了评估,并将其与其他 SE 计算方法进行了比较。模拟研究表明,我们的方法改进了频繁法在有限距离下获得的结果。然而,在实际案例研究中观察到的高变异性和高相关性情况下,该方法表现不佳,强调了校准的必要性。
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Uncertainty Computation at Finite Distance in Nonlinear Mixed Effects Models-a New Method Based on Metropolis-Hastings Algorithm.

The standard errors (SE) of the maximum likelihood estimates (MLE) of the population parameter vector in nonlinear mixed effect models (NLMEM) are usually estimated using the inverse of the Fisher information matrix (FIM). However, at a finite distance, i.e. far from the asymptotic, the FIM can underestimate the SE of NLMEM parameters. Alternatively, the standard deviation of the posterior distribution, obtained in Stan via the Hamiltonian Monte Carlo algorithm, has been shown to be a proxy for the SE, since, under some regularity conditions on the prior, the limiting distributions of the MLE and of the maximum a posterior estimator in a Bayesian framework are equivalent. In this work, we develop a similar method using the Metropolis-Hastings (MH) algorithm in parallel to the stochastic approximation expectation maximisation (SAEM) algorithm, implemented in the saemix R package. We assess this method on different simulation scenarios and data from a real case study, comparing it to other SE computation methods. The simulation study shows that our method improves the results obtained with frequentist methods at finite distance. However, it performed poorly in a scenario with the high variability and correlations observed in the real case study, stressing the need for calibration.

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来源期刊
AAPS Journal
AAPS Journal 医学-药学
CiteScore
7.80
自引率
4.40%
发文量
109
审稿时长
1 months
期刊介绍: The AAPS Journal, an official journal of the American Association of Pharmaceutical Scientists (AAPS), publishes novel and significant findings in the various areas of pharmaceutical sciences impacting human and veterinary therapeutics, including: · Drug Design and Discovery · Pharmaceutical Biotechnology · Biopharmaceutics, Formulation, and Drug Delivery · Metabolism and Transport · Pharmacokinetics, Pharmacodynamics, and Pharmacometrics · Translational Research · Clinical Evaluations and Therapeutic Outcomes · Regulatory Science We invite submissions under the following article types: · Original Research Articles · Reviews and Mini-reviews · White Papers, Commentaries, and Editorials · Meeting Reports · Brief/Technical Reports and Rapid Communications · Regulatory Notes · Tutorials · Protocols in the Pharmaceutical Sciences In addition, The AAPS Journal publishes themes, organized by guest editors, which are focused on particular areas of current interest to our field.
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