脑脊液蛋白质组图谱揭示可逆性脑血管收缩综合征的分子特征

IF 6.1 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Molecular & Cellular Proteomics Pub Date : 2024-07-01 Epub Date: 2024-06-03 DOI:10.1016/j.mcpro.2024.100794
Jhih-Ci Yang, Shih-Pin Chen, Yen-Feng Wang, Chan-Hua Chang, Kun-Hao Chang, Jong-Ling Fuh, Lok-Hi Chow, Chia-Li Han, Yu-Ju Chen, Shuu-Jiun Wang
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引用次数: 0

摘要

可逆性脑血管收缩综合征(RCVS)是一种复杂的神经血管疾病,以重复性雷鸣般头痛和可逆性脑血管收缩为特征。这一神秘综合征的病理生理机制仍未得到充分探索,临床上也没有可用的分子生物标记物。为了深入了解 RCVS 的发病机制,本研究首次利用数据无关采集质谱(DIA-MS)技术,报告了与年龄和性别匹配的对照组(20 人)相比,RCVS 患者(21 人)脑脊液(CSF)蛋白质组失调的情况。采用蛋白质-蛋白质相互作用和功能富集分析,利用 RCVS 蛋白质组构建功能蛋白质网络。建立的RCVS-CSF蛋白质组资源库包含1,054种蛋白质,它揭示了大脑和血脑屏障(BBB)中富集的大量上调蛋白质。来自17名RCVS患者和20名对照组的个性化RCVS-CSF蛋白质组图谱揭示了涉及补体系统、粘附分子和细胞外基质的蛋白质组变化,这些变化可能导致了BBB的破坏和神经血管单元的失调。此外,一个额外的验证队列验证了一组候选生物标记物和一个由机器学习模型预测的双蛋白特征,它们能区分 RCVS 患者和对照组,曲线下面积为 0.997。这项研究首次揭示了 RCVS 蛋白组以及 BBB 和神经血管单元功能障碍的潜在发病机制。它还提出了RCVS机理上可信的潜在候选生物标记物,这些候选生物标记物可能会在临床表现之外提供潜在的诊断和治疗机会。
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Cerebrospinal Fluid Proteome Map Reveals Molecular Signatures of Reversible Cerebral Vasoconstriction Syndrome.

Reversible cerebral vasoconstriction syndrome (RCVS) is a complex neurovascular disorder characterized by repetitive thunderclap headaches and reversible cerebral vasoconstriction. The pathophysiological mechanism of this mysterious syndrome remains underexplored and there is no clinically available molecular biomarker. To provide insight into the pathogenesis of RCVS, this study reported the first landscape of dysregulated proteome of cerebrospinal fluid (CSF) in patients with RCVS (n  =  21) compared to the age- and sex-matched controls (n  =  20) using data-independent acquisition mass spectrometry. Protein-protein interaction and functional enrichment analysis were employed to construct functional protein networks using the RCVS proteome. An RCVS-CSF proteome library resource of 1054 proteins was established, which illuminated large groups of upregulated proteins enriched in the brain and blood-brain barrier (BBB). Personalized RCVS-CSF proteomic profiles from 17 RCVS patients and 20 controls reveal proteomic changes involving the complement system, adhesion molecules, and extracellular matrix, which may contribute to the disruption of BBB and dysregulation of neurovascular units. Moreover, an additional validation cohort validated a panel of biomarker candidates and a two-protein signature predicted by machine learning model to discriminate RCVS patients from controls with an area under the curve of 0.997. This study reveals the first RCVS proteome and a potential pathogenetic mechanism of BBB and neurovascular unit dysfunction. It also nominates potential biomarker candidates that are mechanistically plausible for RCVS, which may offer potential diagnostic and therapeutic opportunities beyond the clinical manifestations.

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来源期刊
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics 生物-生化研究方法
CiteScore
11.50
自引率
4.30%
发文量
131
审稿时长
84 days
期刊介绍: The mission of MCP is to foster the development and applications of proteomics in both basic and translational research. MCP will publish manuscripts that report significant new biological or clinical discoveries underpinned by proteomic observations across all kingdoms of life. Manuscripts must define the biological roles played by the proteins investigated or their mechanisms of action. The journal also emphasizes articles that describe innovative new computational methods and technological advancements that will enable future discoveries. Manuscripts describing such approaches do not have to include a solution to a biological problem, but must demonstrate that the technology works as described, is reproducible and is appropriate to uncover yet unknown protein/proteome function or properties using relevant model systems or publicly available data. Scope: -Fundamental studies in biology, including integrative "omics" studies, that provide mechanistic insights -Novel experimental and computational technologies -Proteogenomic data integration and analysis that enable greater understanding of physiology and disease processes -Pathway and network analyses of signaling that focus on the roles of post-translational modifications -Studies of proteome dynamics and quality controls, and their roles in disease -Studies of evolutionary processes effecting proteome dynamics, quality and regulation -Chemical proteomics, including mechanisms of drug action -Proteomics of the immune system and antigen presentation/recognition -Microbiome proteomics, host-microbe and host-pathogen interactions, and their roles in health and disease -Clinical and translational studies of human diseases -Metabolomics to understand functional connections between genes, proteins and phenotypes
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