冷冻电子显微镜网格制备:近距离观察制备模式和新方法的进步和影响。

IF 3.8 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Society transactions Pub Date : 2024-06-26 DOI:10.1042/BST20231553
Isobel J Hirst, William J R Thomas, Rhiannon A Davies, Stephen P Muench
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引用次数: 0

摘要

在单颗粒冷冻电镜(cryoEM)中,样品制备是一个重大障碍,会导致重现性、数据质量或无法观察样品等问题。影响因素有多种,包括样品或缓冲液成分、网格类型、样品制备路径以及与空气-水界面 (AWI) 的相互作用。在此,我们回顾了一些当前的样品制备方法和相关挑战。我们讨论了克服这些挑战的一系列方法,如尽量缩短网格制备时间、表面活性剂、网格类型和生化方法(如纳米磁珠)。最后,我们讨论了如何将一组市售蛋白质样本作为未来技术的基准套件。这不仅为比较各种技术生成高分辨率结构的能力提供了途径,也为克服传统上与冷冻电镜相关的挑战提供了途径。随着这一领域不断涌现出新的样品制备方法,我们也开始更好地理解蛋白质在薄膜内的行为以及对不同环境(尤其是网格组成)的反应背后的基本原理,我们希望能提供更通用的解决方案,使棘手的系统变得简单易行,提高分辨率,更重要的是,加快数据收集速度,减少目前所需的数据集大小。
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CryoEM grid preparation: a closer look at advancements and impact of preparation mode and new approaches.

Sample preparation can present a significant hurdle within single particle cryo-electron microscopy (cryoEM), resulting in issues with reproducibility, data quality or an inability to visualise the sample. There are several factors which can influence this, including sample or buffer composition, grid type, route of sample preparation and interactions with the air-water interface (AWI). Here, we review some of the current routes for sample preparation and the associated challenges. We discuss a range of approaches for overcoming these challenges, such as minimising the grid preparation time, surfactants, grid type and biochemical approaches such as nanomagnetic beads. Finally, we discuss how a set of commercially available protein samples may serve as a benchmark suite for future technologies. This provides a route to compare techniques' abilities not just to generate high-resolution structures but also to overcome the challenges traditionally associated with cryoEM. As the field continues to produce new approaches to sample preparation and we start to better understand the underlying principles behind the behaviour of proteins within a thin film and in response to different environments, especially grid composition, it is hoped that more universal solutions can be provided that make the intractable systems tractable, improve resolution and, importantly, speed up data collection and reduce the currently required dataset sizes.

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来源期刊
Biochemical Society transactions
Biochemical Society transactions 生物-生化与分子生物学
CiteScore
7.80
自引率
0.00%
发文量
351
审稿时长
3-6 weeks
期刊介绍: Biochemical Society Transactions is the reviews journal of the Biochemical Society. Publishing concise reviews written by experts in the field, providing a timely snapshot of the latest developments across all areas of the molecular and cellular biosciences. Elevating our authors’ ideas and expertise, each review includes a perspectives section where authors offer comment on the latest advances, a glimpse of future challenges and highlighting the importance of associated research areas in far broader contexts.
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