从潮间带沉积物中分离出的 Elongatibacter sediminis gen.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-07-01 DOI:10.1099/ijsem.0.006440
Xin-Yue Zhang, Yu-Qi Ye, Yan-Jun Feng, Hong-Nan Gong, Zong-Jun Du, Meng-Qi Ye
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引用次数: 0

摘要

在对中国威海小西岛采集的潮间带沉积物进行细菌资源调查时,分离到了一株略嗜卤、需氧、革兰氏染色阴性的新型菌株,命名为 CH-27T。CH-27T 菌株的细胞呈杆状,宽度为 0.3-0.6 微米,长度为 2.0-11.0 微米。CH-27T 菌株在 37 °C、pH 7.0 和 2.0 %(w/v)氯化钠条件下生长最佳。过氧化氢酶活性呈弱阳性,氧化酶活性呈阳性。基于 16S rRNA 基因序列的系统进化分析表明,菌株 CH-27T 与 Marinihelvus fidelis KCTC 92639T 的亲缘关系最密切(93.6%),其次是温州浒苔属菌株 MCCC 1K00261T(92.0%)。根据菌株 CH-27T 与 M. fidelis KCTC 92639T 的基因组比较,两者的平均氨基酸相同度为 63.6%,保守蛋白的百分比为 48.3%。菌株 CH-27T 的主要细胞脂肪酸(≥10 %)为异-C15 :0,唯一的呼吸醌是醌-8。极性脂质为磷脂酰甘油、磷脂酰乙醇胺、二磷脂酰甘油和氨基磷脂。DNA G+C 含量为 62.7 摩尔%。根据对其系统发生学、生理学、生物化学和化学分类学特征的综合分析,CH-27T 菌株代表了一个新属中的新物种,拟命名为 Elongatibacter sediminis gen.模式菌株为 CH-27T(=MCCC 1H00480T=KCTC 8011T)。
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Elongatibacter sediminis gen. nov., sp. nov., isolated from intertidal sediment, and genomic comparison with all genera in the family Wenzhouxiangellaceae.

A novel slightly halophilic, aerobic, and Gram-stain-negative strain, designated as CH-27T, was isolated during a bacterial resource investigation of intertidal sediment collected from Xiaoshi Island in Weihai, PR China. Cells of strain CH-27T were rod-shaped with widths of 0.3-0.6 µm and lengths of 2.0-11.0 µm. Strain CH-27T grew optimally at 37 °C, pH 7.0 and with 2.0 % (w/v) NaCl. Catalase activity was weakly positive and oxidase activity was positive. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CH-27T was most related to Marinihelvus fidelis KCTC 92639T (93.6 %), followed by Wenzhouxiangella marina MCCC 1K00261T (92.0 %). Based on genome comparisons between strain CH-27T and M. fidelis KCTC 92639T, the average amino acid identity was 63.6 % and the percentage of conserved proteins was 48.3 %. The major cellular fatty acid of strain CH-27T (≥10 %) was iso-C15 : 0 and the sole respiratory quinone was quinone-8. The polar lipids were phosphatidylglycerol, phosphatidylethanolamine, diphosphatidylglycerol, and aminophospholipid. The DNA G+C content was 62.7 mol%. Based on comprehensive analysis of its phylogenetic, physiological, biochemical, and chemotaxonomic characteristics, strain CH-27T represents a novel species in a novel genus, for which the name Elongatibacter sediminis gen. nov., sp.nov. is proposed. The type strain is CH-27T (=MCCC 1H00480T=KCTC 8011T).

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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