Aurantiacibacter hainanensis sp.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-07-01 DOI:10.1099/ijsem.0.006469
Wen-Jia Liu, Yu Zhang, Ke Cao, Jia-Xi Li, Yu-Qiao Wen, Cong Sun, Lin Xu
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The predominant cellular fatty acids of strain H149<sup>T</sup> were C<sub>16 : 0</sub>, summed feature 3 and summed feature 8, while those of strain Z2<sup>T</sup> were C<sub>17 : 1</sub> <i> ω</i>6<i>c</i>, summed feature 3 and summed feature 8. Strains H149<sup>T</sup> and Z2<sup>T</sup> shared diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine and sphingoglycolipid as major polar lipids. The 16S rRNA gene sequence identity analysis indicated that strain H149<sup>T</sup> had the highest sequence identity of 98.4 % with <i>Aurantiacibacter odishensis</i> KCTC 23981<sup>T</sup>, and strain Z2<sup>T</sup> had that of 98.2 % with <i>Qipengyuania pacifica</i> NZ-96<sup>T</sup>. Phylogenetic trees based on 16S rRNA gene and core-genome sequences revealed that strains H149<sup>T</sup> and Z2<sup>T</sup> formed two independent clades in the genera <i>Aurantiacibacter</i> and <i>Qipengyuania</i>, respectively. Strain H149<sup>T</sup> had average nucleotide identity values of 74.0-81.3 % and <i>in silico</i> DNA-DNA hybridization values of 18.5-23.1 % with <i>Aurantiacibacter</i> type strains, while strain Z2<sup>T</sup> had values of 73.3-78.7 % and 14.5-33.3 % with <i>Qipengyuania</i> type strains. The genomic DNA G+C contents of strains H149<sup>T</sup> and Z2<sup>T</sup> were 64.3 and 61.8 %, respectively. Based on the genetic, genomic, phylogenetic, physiological and chemotaxonomic results, strains H149<sup>T</sup> (=KCTC 8397<sup>T</sup>=MCCC 1K08920<sup>T</sup>) and Z2<sup>T</sup> (=KCTC 8396<sup>T</sup>=MCCC 1K08946<sup>T</sup>) are concluded to represent two novel <i>Erythrobacteraceae</i> species for which the names <i>Aurantiacibacter hainanensis</i> sp. nov. and <i>Qipengyuania zhejiangensis</i> sp. nov. are proposed, respectively.</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Aurantiacibacter hainanensis</i> sp. nov. and <i>Qipengyuania zhejiangensis</i> sp. nov., two novel <i>Erythrobacteraceae</i> species isolated from tidal flat sediments.\",\"authors\":\"Wen-Jia Liu, Yu Zhang, Ke Cao, Jia-Xi Li, Yu-Qiao Wen, Cong Sun, Lin Xu\",\"doi\":\"10.1099/ijsem.0.006469\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Two Gram-stain-negative, rod-shaped, non-motile, aerobic and carotenoid-producing strains, belonging to the family <i>Erythrobacteraceae,</i> designated as H149<sup>T</sup> and Z2<sup>T</sup>, were isolated from tidal flat sediment samples collected in Hainan and Zhejiang, PR China, respectively. 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引用次数: 0

摘要

研究人员分别从中国海南和浙江采集的潮滩沉积物样品中分离出两株革兰氏染色阴性、杆状、无运动性、需氧、产类胡萝卜素的菌株,属于红杆菌科,命名为 H149T 和 Z2T。菌株 H149T 在 15-42 ℃、0-10.0%(w/v)NaCl 和 pH 6.0-8.5 条件下生长,最适生长温度为 35-37℃、3.0-3.5%(w/v)NaCl 和 pH 7.0。菌株 Z2T 在 15-37 ℃、0-6.0%(w/v)NaCl 和 pH 6.0-9.5 条件下生长,最适生长温度为 25-30℃、0.5-1.0%(w/v)NaCl 和 pH 6.0-6.5。两个菌株中的泛醌-10 是唯一的泛醌。菌株 H149T 的主要细胞脂肪酸为 C16 :0、总特征 3 和总特征 8,而菌株 Z2T 的主要细胞脂肪酸为 C17 :1 ω6c、总特征 3 和总特征 8。菌株 H149T 和 Z2T 的主要极性脂质为二磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱和鞘磷脂。16S rRNA 基因序列同一性分析表明,菌株 H149T 与 Aurantiacibacter odishensis KCTC 23981T 的序列同一性最高,为 98.4%;菌株 Z2T 与 Qipengyuania pacifica NZ-96T 的序列同一性为 98.2%。基于 16S rRNA 基因和核心基因组序列的系统发生树显示,菌株 H149T 和 Z2T 分别在 Aurantiacibacter 属和 Qipengyuania 属中形成了两个独立的支系。菌株 H149T 与 Aurantiacibacter 型菌株的平均核苷酸同一性值为 74.0-81.3%,硅 DNA-DNA 杂交值为 18.5-23.1%;而菌株 Z2T 与 Qipengyuania 型菌株的同一性值为 73.3-78.7%,硅 DNA-DNA 杂交值为 14.5-33.3%。菌株 H149T 和 Z2T 的基因组 DNA G+C 含量分别为 64.3 % 和 61.8 %。根据遗传学、基因组学、系统发生学、生理学和化学分类学的结果,H149T(=KCTC 8397T=MCCC 1K08920T)和 Z2T(=KCTC 8396T=MCCC 1K08946T)菌株被认为是两个新的赤霉菌科菌株,并分别命名为 Aurantiacibacter hainanensis sp.nov.和 Qipengyuania zhejiangensis sp.nov.。
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Aurantiacibacter hainanensis sp. nov. and Qipengyuania zhejiangensis sp. nov., two novel Erythrobacteraceae species isolated from tidal flat sediments.

Two Gram-stain-negative, rod-shaped, non-motile, aerobic and carotenoid-producing strains, belonging to the family Erythrobacteraceae, designated as H149T and Z2T, were isolated from tidal flat sediment samples collected in Hainan and Zhejiang, PR China, respectively. Growth of strain H149T occurred at 15-42 °C, 0-10.0 % (w/v) NaCl, and pH 6.0-8.5, with the optima at 35-37 °C, 3.0-3.5 % (w/v) NaCl and pH 7.0. Strain Z2T grew at 15-37 °C, 0-6.0 % (w/v) NaCl, and pH 6.0-9.5, with the optima at 25-30 °C, 0.5-1.0 % (w/v) NaCl and pH 6.0-6.5. Ubiquinone-10 was the sole ubiquinone in two strains. The predominant cellular fatty acids of strain H149T were C16 : 0, summed feature 3 and summed feature 8, while those of strain Z2T were C17 : 1  ω6c, summed feature 3 and summed feature 8. Strains H149T and Z2T shared diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine and sphingoglycolipid as major polar lipids. The 16S rRNA gene sequence identity analysis indicated that strain H149T had the highest sequence identity of 98.4 % with Aurantiacibacter odishensis KCTC 23981T, and strain Z2T had that of 98.2 % with Qipengyuania pacifica NZ-96T. Phylogenetic trees based on 16S rRNA gene and core-genome sequences revealed that strains H149T and Z2T formed two independent clades in the genera Aurantiacibacter and Qipengyuania, respectively. Strain H149T had average nucleotide identity values of 74.0-81.3 % and in silico DNA-DNA hybridization values of 18.5-23.1 % with Aurantiacibacter type strains, while strain Z2T had values of 73.3-78.7 % and 14.5-33.3 % with Qipengyuania type strains. The genomic DNA G+C contents of strains H149T and Z2T were 64.3 and 61.8 %, respectively. Based on the genetic, genomic, phylogenetic, physiological and chemotaxonomic results, strains H149T (=KCTC 8397T=MCCC 1K08920T) and Z2T (=KCTC 8396T=MCCC 1K08946T) are concluded to represent two novel Erythrobacteraceae species for which the names Aurantiacibacter hainanensis sp. nov. and Qipengyuania zhejiangensis sp. nov. are proposed, respectively.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
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2.10%
发文量
464
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