多组学筛选确定了介导暴露于环境化学品对心脏代谢特征影响的 CpG 位点和基因。

IF 2.5 Q3 GENETICS & HEREDITY Epigenomes Pub Date : 2024-07-29 DOI:10.3390/epigenomes8030029
Majid Nikpay
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引用次数: 0

摘要

了解环境化学物质导致疾病的分子机制对于未来的应用非常重要。在这项研究中,我们设计了一个多组学工作流程,将几个公开可用的数据集结合起来,以确定介导暴露于环境化学物质对心脏代谢特征影响的 CpG 位点和基因。此前有报道称,有机磷和产前铅暴露会改变 cg23627948 位点的甲基化水平。本研究的分析结果显示,随着 cg23627948 位点的甲基化,GNA12 基因的表达会降低,从而导致体脂率升高。据报道,产前接触全氟辛烷磺酸会增加 cg21153102 位点的甲基化水平。该研究结果显示,该位点的甲基化水平升高会改变 CHP1 和 GCHFR 基因的表达,从而导致舒张压升高。此外,HKR1 介导了补充 B12 → cg05280698 高甲基化对高肾功能的影响,而 CTDNEP1 介导了空气污染 → cg03186999 低甲基化对高收缩压的影响。这项研究调查了介导环境化学物质对心脏代谢特征影响的 CpG 位点和基因。此外,本研究中描述的多组学方法提供了一种便捷的工作流程,可利用公开数据研究环境因素对人体生物标志物的影响,进而研究环境因素对健康状况的影响。
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Multiomics Screening Identified CpG Sites and Genes That Mediate the Impact of Exposure to Environmental Chemicals on Cardiometabolic Traits.

An understanding of the molecular mechanism whereby an environmental chemical causes a disease is important for the purposes of future applications. In this study, a multiomics workflow was designed to combine several publicly available datasets in order to identify CpG sites and genes that mediate the impact of exposure to environmental chemicals on cardiometabolic traits. Organophosphate and prenatal lead exposure were previously reported to change methylation level at the cg23627948 site. The outcome of the analyses conducted in this study revealed that, as the cg23627948 site becomes methylated, the expression of the GNA12 gene decreases, which leads to a higher body fat percentage. Prenatal perfluorooctane sulfonate exposure was reported to increase the methylation level at the cg21153102 site. Findings of this study revealed that higher methylation at this site contributes to higher diastolic blood pressure by changing the expression of CHP1 and GCHFR genes. Moreover, HKR1 mediates the impact of B12 supplementation → cg05280698 hypermethylation on higher kidney function, while CTDNEP1 mediates the impact of air pollution → cg03186999 hypomethylation on higher systolic blood pressure. This study investigates CpG sites and genes that mediate the impact of environmental chemicals on cardiometabolic traits. Furthermore, the multiomics approach described in this study provides a convenient workflow with which to investigate the impact of an environmental factor on the body's biomarkers, and, consequently, on health conditions, using publicly available data.

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来源期刊
Epigenomes
Epigenomes GENETICS & HEREDITY-
CiteScore
3.80
自引率
0.00%
发文量
38
审稿时长
11 weeks
期刊最新文献
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